Protein

View in Explore
Genbank accession
XNZ85888.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSRTLPLTLNYKSAEPLENRNLSIVGAGGKGSTAGRTPVESPDSLRSISYAKTILLLGEGEMRGLVNGYRSVYLQGTPLQNSDGTFNFQNVAVETRSGTQDQSYIPGFPSVENEVIVGVELRADTPIVRLVSGSDLSAVRVRVAVDSLQKVDTSNGDTVGYSVAYAIDVATDGGAYTTVLNSAFTGKTTTQYERSHRIDLPAGSQWQIRIRRTTPNANSSTVADTTRVQSITEIIDAKLRYPNSALLAVAVDAQQFQSLPTIACNVYGRIIKVPANYDPELRTYATTGIGTTNGVWNGTFKSAWTNNPAWVFYDIVTNDRFGLGNNIPAAWVDVWNLYQIAQYCDEMVSDGFGGQEPRFTCNVYMQTRADAYKVLQDLAAVFRGVSYYAVGQMIASADMPKQVSVGYTNADVVDGKFNYEGTARKVRHTVALVSWSDQSDMGRQKVERVEYRPGLIRYGIQETEVTAIGCTSRGQAQRIGNHILISENIELETVSFKVGLEGMLVSPGDVFNVSNRNRAGKRMGGRISAYTVDTVTVDLVPDDIVAGDKIKVMLSTGRIEERTIQSISGNVVTVTVDWSANPAPQGVFIFEQTELVAETFRCVAVADNEDGTYTIAGLTYRGDKFAYIDDGTRLEQPPISVIPPSIQAPPANVTISSFSVIDQAIARTDVTIQWDAAPNAIEYEVEWRRDDMDWVRVGRVSSTSVDIRGAYSGRYLARVRAVNALGARSIPSTSALTQIVGKTEPPPALSSLTTTSIVFAIGLRWGFPQGATDTERTEIWYSQGPDRASAIKLGDFAYPQDRHQINGLAAGAKFYFWGRLVDRSGNIGPWYPTGTGVVGESSVDQTEYDAYFSGRITESALGQDLLSKIDSIDNIVPLIYDPEAVYEEGQTVIYGGRIYSWTNPTPGNNEPPSADWQDVGEAIAQAGAIVGRVDQLELDVSEIEGQVVAQGQKVDGLFASIDTQFTGDEDDYTADNDVFAGTTTVQTVIATQDYALSKRVEAVQSTVGEVSATVQETSQAIVDLDGQISASWTLKLQVAANGQYYAAGMGVGIQNQPDGSFQSQILMQADRFAVINVANGQVTSPFVIQGGQTFISQALIGTSRITNAMIANAAITNAKISGTIQSDDYVSGQTGWRINKAAGGGFEFNGSIAGGYRLNITNQGVYIYYPNGNPAVELGVLL
Physico‐chemical
properties
protein length:1182 AA
molecular weight: 127767,91180 Da
isoelectric point:4,71215
aromaticity:0,08714
hydropathy:-0,18198

Domains

Domains [InterPro]
DC_0014
STR
6–1181
DC_0014
IPR053171
Unmapped
16–968
IPR053171 IPR015406
IPR055385
ATT
111–237
IPR055385 IPR032876 IPR013783
IPR036116
STR
649–738
IPR036116
IPR003961
STR
649–746
IPR003961
IPR003961
STR
649–734
IPR003961
XNZ85888.1
1 1182
Architecture
STR
ATT
STR
ATT
STR
STR 6-110 | ATT 111-237 | STR 238-367 | ATT 368-529 | STR 530-1181 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85888.1
1 1182
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,8597
Central domain 527 1121 596 0,0442
C-terminal 1122 1182 60 0,9376
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-1121
C-terminal
1122-1182

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP5phi2
[NCBI] 		3162015 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85888.1 [NCBI]
Genbank nucleotide accession
PQ498459.1 [NCBI]
CDS location
range 27738 -> 31286
strand +
CDS
ATGTCGAGGACATTGCCTCTAACGCTTAACTATAAATCGGCGGAACCATTGGAAAACAGAAACCTATCTATCGTTGGCGCTGGCGGAAAGGGTTCGACGGCTGGCCGTACTCCCGTAGAGTCTCCCGATAGCCTGCGGTCTATTTCCTATGCCAAGACTATCCTCCTTCTCGGCGAGGGGGAGATGCGCGGGCTTGTCAACGGCTATAGGTCTGTATATCTGCAAGGAACTCCTCTACAGAATTCAGACGGCACATTCAACTTCCAGAATGTGGCTGTTGAAACTCGCTCAGGAACTCAGGATCAGTCATATATTCCTGGCTTCCCAAGTGTTGAGAATGAGGTAATCGTAGGCGTAGAGCTTCGCGCTGATACTCCTATCGTACGCTTGGTTTCAGGTTCGGACCTTTCTGCTGTCCGTGTGCGCGTTGCTGTAGATTCATTGCAGAAGGTAGACACCAGCAATGGCGATACGGTTGGCTACAGCGTGGCCTATGCCATTGATGTTGCTACGGATGGTGGCGCATACACTACCGTATTGAATAGTGCGTTTACTGGAAAAACGACTACGCAGTATGAGCGCAGCCATCGTATTGACTTGCCAGCCGGGAGTCAGTGGCAAATCCGCATTCGCCGCACGACTCCGAACGCAAACTCATCTACTGTCGCTGACACGACCCGCGTTCAGTCTATCACCGAGATTATCGACGCCAAGCTGCGCTATCCGAATAGCGCTCTTCTAGCCGTCGCTGTGGATGCTCAGCAGTTCCAGAGCCTGCCAACCATCGCCTGCAACGTCTATGGGCGAATCATCAAGGTTCCGGCTAACTACGACCCTGAGCTTAGGACGTATGCAACTACTGGTATTGGCACTACCAATGGCGTATGGAACGGAACCTTTAAGTCTGCATGGACTAACAATCCGGCATGGGTTTTCTATGACATTGTTACCAATGACCGATTTGGCCTAGGCAATAACATACCTGCGGCATGGGTTGATGTGTGGAACCTTTATCAGATTGCTCAGTATTGCGATGAAATGGTTTCGGATGGCTTCGGTGGTCAGGAGCCTCGATTTACCTGCAATGTCTACATGCAGACCCGCGCTGATGCATACAAGGTGCTTCAGGACCTGGCTGCGGTGTTCCGTGGCGTAAGCTATTACGCCGTTGGGCAAATGATTGCATCGGCTGATATGCCCAAGCAGGTATCAGTAGGTTACACAAATGCTGATGTGGTTGATGGGAAGTTCAACTATGAAGGTACGGCGCGTAAAGTCCGCCATACGGTTGCGCTTGTATCGTGGTCAGATCAGTCCGATATGGGGCGCCAGAAAGTTGAGCGTGTTGAATACCGTCCTGGCCTAATCCGCTATGGCATTCAAGAGACTGAAGTTACCGCAATTGGTTGCACTTCTCGCGGGCAGGCTCAGCGTATTGGCAATCACATTCTCATATCTGAGAACATCGAGCTTGAGACGGTAAGCTTTAAAGTCGGACTTGAGGGGATGCTTGTATCTCCTGGAGACGTGTTCAATGTCTCCAATAGAAATCGTGCTGGTAAGCGTATGGGCGGCAGAATCTCGGCTTACACAGTCGATACGGTTACTGTTGATCTTGTGCCCGATGACATTGTTGCTGGCGATAAGATCAAAGTCATGTTGTCTACTGGCAGGATCGAAGAAAGGACGATTCAGTCTATCTCCGGAAATGTTGTAACCGTAACAGTAGACTGGTCCGCCAACCCTGCACCGCAGGGGGTATTCATTTTTGAACAGACTGAACTAGTTGCGGAAACATTCCGTTGCGTAGCCGTCGCTGACAATGAGGATGGAACATACACAATCGCTGGGCTTACCTATCGTGGCGACAAGTTTGCTTATATCGATGATGGTACACGCCTAGAACAGCCTCCGATTAGCGTTATTCCTCCTAGCATCCAGGCCCCGCCTGCTAACGTTACGATTAGCTCGTTCTCTGTCATTGATCAGGCCATTGCGAGGACGGACGTTACGATTCAGTGGGATGCTGCACCTAATGCCATTGAGTACGAAGTTGAGTGGCGCAGAGATGACATGGATTGGGTGCGTGTGGGTCGAGTTAGCTCTACCAGTGTAGACATTCGCGGAGCTTACTCGGGCCGGTATCTGGCCCGCGTCAGGGCTGTAAACGCGCTTGGCGCTAGGTCTATCCCATCTACCAGCGCCTTAACTCAGATTGTCGGCAAGACTGAGCCGCCGCCTGCGCTGAGCTCTCTAACTACTACAAGCATTGTTTTTGCTATTGGCTTGCGCTGGGGCTTCCCGCAAGGAGCTACGGACACAGAGCGCACAGAGATTTGGTATTCGCAAGGTCCAGATAGAGCGAGCGCAATCAAACTTGGTGACTTCGCATATCCGCAAGATAGGCATCAGATCAACGGCCTTGCTGCTGGCGCTAAGTTCTATTTTTGGGGGCGATTGGTTGACCGCAGCGGCAATATCGGCCCTTGGTACCCGACTGGAACGGGCGTTGTCGGAGAGTCGAGTGTAGATCAAACAGAATACGATGCCTATTTCTCAGGGCGCATAACTGAAAGTGCACTTGGTCAGGATTTGCTGTCTAAGATTGATAGCATCGACAACATTGTTCCTCTTATTTATGACCCTGAGGCCGTGTATGAAGAGGGCCAGACGGTTATCTATGGGGGACGAATCTATAGCTGGACAAATCCGACACCAGGAAACAATGAGCCGCCCAGCGCAGACTGGCAGGATGTGGGTGAGGCAATTGCACAGGCTGGCGCTATTGTTGGCCGTGTTGATCAGCTAGAGCTTGACGTATCTGAAATTGAGGGACAAGTAGTTGCTCAGGGACAAAAGGTAGATGGACTTTTTGCATCCATCGATACTCAATTCACTGGCGATGAAGACGACTACACCGCTGACAATGATGTTTTTGCTGGCACAACTACGGTTCAGACAGTTATTGCGACTCAGGACTATGCGCTAAGTAAGCGCGTTGAGGCTGTGCAATCTACGGTTGGAGAAGTTTCCGCTACCGTTCAGGAGACTTCTCAGGCCATTGTTGATCTTGATGGACAGATCAGCGCATCCTGGACGCTAAAGCTACAGGTAGCTGCCAATGGTCAGTATTACGCTGCTGGCATGGGTGTTGGCATACAGAATCAGCCTGACGGTAGTTTCCAGTCTCAGATTCTCATGCAGGCTGACCGATTCGCTGTAATCAACGTTGCTAATGGTCAAGTTACTAGCCCATTTGTCATCCAAGGTGGTCAGACGTTCATTAGTCAGGCGCTAATCGGCACTAGCCGGATTACTAACGCAATGATCGCAAACGCCGCGATCACCAATGCGAAGATTAGCGGTACAATACAATCTGACGACTATGTTTCAGGCCAAACTGGATGGCGCATCAACAAGGCCGCTGGCGGTGGGTTTGAGTTCAACGGATCAATCGCAGGAGGATACCGATTGAACATCACTAACCAAGGTGTATATATCTACTACCCTAATGGCAATCCGGCTGTTGAATTGGGAGTTCTGCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
305a044df41b2fbbe519043cdbd8079757ea6a4378ae421cfd3e93d9a8c6c99c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Monsibais,A.N., Tea,O., Ghatbale,P., Whiteson,K.L. and Pride,D. — — GenBank