Protein

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Genbank accession
YP_009044906.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVYNKHEWQDGELITSGKLNHMELGIQLADKQVSVKDYGAVGDGVADDTKSFINAFSENKGTKVIIPTGTYLITKQVSIFGDVEFQNAKVISTNNSQDYMFNVDGLDEINIIGFKYNNDKGRGAIKISNTKTVRLTSFDISGYSAETAYHKTDSALMLDNNTTIYLDDIKVHDHGFQYGAELEHLNRCISIQGDKTKTVIARGLQFSKANQGLVLSTPNGNVIVSDSSIDNTTDNSMYLLACLTFMATNVRFDDYYDESVIMGSGDYSFTNCWFSNVPNKVFGINNDTVGLSIIGCNIIQSDKHSGQIVSFRDVNYTLNTFIFESNRIVTAPDSTNNDLFYLGQINLFSIKNNTIKTFSISDGRNMFAFRNSDSNAPYTGVIKDNYVMPITKDVVIGTYYFARLYKEVGKVEISDNYISNGRMPMDNASVIYNGQKFFTSLGYVIDRTTRQSLYATTIPIKGRFNIGDVVYNTDPSNGVFAWVRVTTGLNNVSGVDWKTVSVN
Physico‐chemical
properties
protein length:503 AA
molecular weight: 55979,04630 Da
isoelectric point:5,35255
aromaticity:0,11133
hydropathy:-0,24612

Domains

Domains [InterPro]
DC_2249
ATT
4–170
DC_2249 DC_2129
IPR012334
STR
26–452
IPR012334
IPR011050
STR
28–290
IPR011050
IPR024535
ENZ
33–233
IPR024535
YP_009044906.1
1 503
Architecture
ATT
STR
ATT 4-170 | STR 171-503
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009044906.1
1 503
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9766
Central domain 50 430 382 0,9897
C-terminal 431 503 72 0,9366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-430
C-terminal
431-503

Taxonomy

  Name Taxonomy ID Lineage
Phage Leuconostoc phage LN34
[NCBI] 		1262519 No lineage information
Host Leuconostoc mesenteroides
[NCBI] 		1245 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009044906.1 [NCBI]
Genbank nucleotide accession
NC_024388 [NCBI]
CDS location
range 24658 -> 26169
strand -
CDS
ATGGTTTATAATAAACACGAGTGGCAAGATGGTGAATTGATAACTTCTGGTAAGTTAAACCACATGGAACTTGGAATACAATTAGCGGATAAACAAGTTTCGGTTAAGGATTACGGTGCAGTTGGAGATGGCGTTGCCGATGACACAAAGTCTTTTATTAATGCTTTCTCAGAAAATAAAGGAACTAAGGTGATTATTCCTACTGGTACGTATCTAATAACTAAGCAAGTATCTATATTTGGAGATGTCGAATTTCAAAATGCAAAAGTTATAAGCACTAACAATTCACAGGATTACATGTTTAATGTTGATGGTTTAGATGAGATTAATATTATTGGGTTCAAGTATAATAATGATAAGGGTAGGGGTGCTATTAAAATATCTAATACTAAAACAGTTAGATTGACAAGTTTTGATATTTCAGGGTATTCAGCAGAGACGGCTTATCATAAAACAGATAGCGCACTAATGCTGGATAATAACACAACTATTTATTTAGATGATATCAAAGTTCATGATCATGGTTTCCAATATGGAGCAGAGTTAGAACATTTGAACCGTTGTATATCTATTCAAGGAGATAAAACAAAAACTGTAATTGCTAGAGGACTTCAATTTAGTAAGGCAAATCAAGGTTTAGTATTATCAACACCAAATGGAAATGTTATTGTTTCTGATAGTTCAATTGATAACACTACGGATAACTCGATGTATTTACTAGCATGTTTAACTTTCATGGCTACTAATGTACGTTTTGATGATTATTATGATGAAAGTGTAATAATGGGTAGTGGGGATTATAGTTTTACAAATTGTTGGTTCTCAAATGTTCCCAACAAGGTGTTTGGTATAAATAATGATACTGTTGGATTGTCTATTATTGGTTGTAATATAATTCAAAGTGATAAGCATTCTGGTCAAATAGTTAGCTTTAGAGATGTAAACTATACGCTTAACACTTTTATTTTTGAAAGTAATAGAATAGTAACCGCACCAGATAGCACAAATAACGATCTATTCTACTTGGGTCAAATCAACTTGTTTTCAATAAAAAATAATACAATAAAGACGTTTAGCATATCAGACGGTAGGAACATGTTTGCGTTTAGAAATTCAGACAGTAATGCACCATATACTGGAGTTATAAAAGATAATTATGTAATGCCAATAACTAAAGACGTAGTTATTGGAACGTATTATTTTGCAAGATTGTACAAAGAGGTTGGAAAAGTCGAAATTTCAGATAATTACATATCAAACGGTAGAATGCCTATGGATAATGCTTCGGTAATATATAACGGACAAAAATTCTTTACTAGTTTAGGTTATGTTATCGATAGAACAACAAGACAATCATTATATGCCACAACCATTCCCATTAAAGGACGGTTTAACATTGGTGATGTTGTTTATAATACTGATCCATCAAACGGTGTATTTGCTTGGGTTAGAGTGACAACAGGATTAAATAATGTTTCTGGTGTTGATTGGAAAACAGTTAGTGTTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c74d4104799cf1335bf660184dedb2c0a3ab9b272c3e1cf0089d5b51a081c99e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50