Protein

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Genbank accession
QVW56318.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MAVVFDPHQKLPGNKITGEPGTVIGTKYRMLVPKNGPFYTGSLVVKSGGKILKLAADYVITHPYMTSMQRTGRATHGMIWIVNPNYTQNFTLDYHAVGIGVGTTAQITAERERNKDAFPSDCQWEMVIGDVYFPPVDIQFDWENWKGERELMTAIAAIGKKLTELPPIPDPIVINTYGFTNYEGNYSRGEVVYQNDASWKFAKKPSSPFYIIQGTNSYLKDYTLAMTFNLPSQVMSSVDNFELSLRSYWGNGFAGIHLRYVSGELQAILYCRDPNGGRYDYLNTPFASVAISTAAFFAKPFKVFVDNSWTNDTMTIRVVQDNATILDTTLDFKNPPASLTALWASQSIGVRLSKRTTDIRYWFYGDVGDTFSVDTMPGANVEKPDGSDVLTILKKYHELVDGLYRNAPAIAHVTDKNNPHGDDSYGRMRAIETNGIADDATLVYGRTQAQLATYVNGLSAKASDFTDKMLRTGADRTITGTFTMMPGLASVTSSKDNESKGVGTNLQVDDKAVRALARDNITVSAGNQPITFKAGGNSFVLYPDSRGLRWNNKIILDPTTVGQYLPGNSGGGDGIYYGANTTTVTITGNGIEAQPFILTFTPPDDSNVNTLALRLLTNDFGDSESLAATPALIKKLAQTFTGKLEKARAYINGVSLASSVTIDKYTLNLGKVENVSDAALPVSDAQATEFAKYAQVGHTHDASAFGIGSATTAKAGLIRYGGLVNDATLALDGSYVVQQLKDVATLESAKNDSDPNAVIDILRYGESGNGEIQAGVTFTGWMVTVKANNYFAGHDYAVPLATYNVAELFPANHEDVTLGIYVDIVDNKAVYVIKDNTDVAESETMTHIGDIFTEEDGIVSASVRNVTRLGDYRELSDHAADVSAHTPRIVSQADFGYTYNPDGVSWVGGSGAVNNVGSDWREFLPDGLTANVAGIPISGGFQTTLGAGVANWLNVTPLSTVKGVNVEFPTNNDAPSGDAVVHLLVYRKGDQFRTLSLGATTSGVNSPAGNRVNLALYGNWRKVTSKINSFTLGINESRYTTASSFDKLNPKITYNLTRGSNIVINGTATLLGYTINYTLTLGAAASTLAITRTDTSETSTIDITSRLADADIDIATLLNSPATPVYFGVGAMLNKAIQLKVSYTAGQFTAQHRYTSAMDYLNNYSELGRVRLYEGAFAGSGTTELKKKVIADNNAGAVGVGDGLPGYINFSGMELKQSGSNYKALVIRD
Physico‐chemical
properties
protein length:1229 AA
molecular weight: 132630,01560 Da
isoelectric point:5,44679
aromaticity:0,09601
hydropathy:-0,18649

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW56318.1
1 1229
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,9951
Central domain 171 827 658 0,3512
C-terminal 828 1229 401 0,1517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-827
C-terminal
828-1229

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_6
[NCBI] 		2835896 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW56318.1 [NCBI]
Genbank nucleotide accession
MW812343 [NCBI]
CDS location
range 150769 -> 154458
strand -
CDS
ATGGCTGTCGTCTTTGACCCGCATCAAAAATTACCGGGTAATAAAATTACCGGTGAGCCGGGAACCGTCATTGGTACGAAGTACCGTATGCTGGTCCCGAAGAATGGCCCTTTTTACACCGGATCATTGGTCGTCAAAAGTGGCGGTAAGATTTTAAAGCTGGCCGCGGACTATGTCATTACACATCCATACATGACATCCATGCAGCGCACCGGTCGCGCCACGCATGGCATGATTTGGATTGTCAACCCCAACTACACGCAAAACTTCACACTCGATTACCATGCGGTCGGTATCGGCGTGGGAACCACAGCACAGATAACAGCTGAGCGTGAGCGTAATAAAGACGCGTTTCCTTCTGATTGCCAATGGGAAATGGTCATTGGGGATGTGTATTTCCCGCCGGTCGATATTCAGTTCGATTGGGAGAATTGGAAAGGTGAGCGTGAGCTGATGACCGCAATCGCGGCCATTGGTAAAAAGCTGACTGAGTTGCCACCTATCCCAGATCCAATTGTTATTAATACGTACGGCTTCACTAACTACGAAGGTAACTATAGCCGTGGTGAAGTTGTGTATCAGAATGATGCCAGTTGGAAATTTGCCAAAAAGCCAAGTAGCCCGTTTTACATCATTCAGGGCACCAACAGTTACCTGAAAGATTATACGCTGGCAATGACATTTAATCTTCCTTCGCAAGTCATGTCATCTGTCGATAATTTTGAACTATCGCTACGTAGTTACTGGGGGAATGGTTTTGCGGGTATTCATTTAAGGTACGTCAGTGGTGAGCTTCAGGCTATTCTATATTGTCGCGATCCTAATGGCGGGAGATACGACTACCTGAATACACCATTCGCATCCGTGGCAATTTCGACCGCTGCTTTCTTTGCGAAACCGTTTAAGGTGTTCGTTGACAACAGCTGGACAAACGATACAATGACCATCCGTGTCGTTCAAGATAATGCCACAATTCTCGACACCACACTGGACTTCAAAAACCCCCCGGCATCGTTAACAGCTTTGTGGGCATCACAATCCATCGGCGTGCGCTTGTCTAAGCGTACAACCGATATCCGTTATTGGTTCTACGGAGACGTTGGCGATACATTCTCGGTAGACACAATGCCCGGTGCAAATGTGGAGAAGCCGGACGGTAGCGATGTCTTAACCATCCTCAAAAAGTACCATGAGCTGGTTGATGGCTTATACCGTAATGCGCCAGCGATTGCTCACGTTACCGATAAGAATAACCCGCATGGGGATGACTCTTACGGACGAATGCGGGCTATTGAGACTAACGGGATTGCGGACGATGCGACACTCGTCTACGGTCGTACACAGGCGCAATTAGCGACCTACGTGAATGGCCTCAGTGCGAAGGCATCGGACTTTACCGATAAAATGCTGCGCACTGGCGCTGACCGGACAATTACCGGAACGTTCACCATGATGCCCGGTTTGGCGTCGGTAACTTCATCGAAGGACAACGAGTCCAAAGGTGTTGGTACCAACTTGCAAGTCGATGACAAAGCGGTTCGTGCATTGGCGCGTGACAATATCACGGTCTCCGCAGGCAACCAACCCATCACGTTCAAAGCAGGCGGGAACAGTTTTGTGCTCTATCCAGACTCGCGTGGTCTGCGCTGGAATAACAAAATCATACTCGACCCGACAACTGTCGGTCAGTACCTGCCGGGGAACAGTGGGGGTGGTGACGGCATCTACTACGGTGCCAATACCACAACGGTGACTATTACTGGTAACGGGATCGAAGCCCAGCCGTTTATCCTGACGTTTACACCGCCTGATGACTCTAACGTGAATACGTTGGCGTTACGGTTGCTGACAAATGACTTCGGCGACTCTGAATCGCTCGCCGCTACACCGGCACTGATTAAGAAGCTGGCGCAGACATTTACCGGAAAACTGGAGAAGGCGCGTGCGTACATCAATGGCGTATCACTGGCCTCATCGGTGACCATCGATAAGTACACCCTGAACCTCGGTAAAGTGGAAAACGTCAGTGACGCGGCATTGCCGGTATCGGACGCGCAAGCGACCGAGTTTGCCAAGTACGCACAGGTGGGTCACACGCACGACGCATCAGCATTCGGTATCGGCTCAGCCACAACAGCCAAAGCCGGTCTGATTCGCTATGGTGGTTTGGTCAACGATGCGACGCTCGCCCTCGATGGGTCGTATGTGGTTCAGCAACTCAAAGACGTTGCGACGCTTGAGTCCGCTAAGAACGACAGTGATCCGAATGCGGTGATTGACATTCTGCGTTACGGGGAGAGTGGTAACGGTGAGATTCAGGCGGGCGTTACCTTTACGGGCTGGATGGTCACGGTAAAAGCGAACAACTATTTCGCCGGTCACGATTATGCCGTTCCATTGGCGACGTACAACGTGGCAGAACTGTTCCCAGCAAACCATGAAGATGTCACGCTGGGTATCTACGTGGATATCGTGGATAACAAAGCGGTCTACGTCATTAAAGACAACACAGACGTTGCAGAGTCGGAAACGATGACGCATATCGGTGATATCTTTACGGAAGAGGACGGTATCGTGAGCGCTTCGGTGCGTAACGTGACCCGTCTTGGTGACTACCGTGAACTGTCTGACCACGCAGCTGACGTCAGCGCCCACACCCCGCGTATTGTCTCGCAGGCGGACTTTGGCTACACGTACAACCCCGATGGGGTGTCATGGGTGGGTGGTTCAGGTGCAGTTAATAACGTAGGAAGTGACTGGCGCGAGTTCTTGCCCGATGGCTTGACGGCTAACGTGGCGGGTATACCTATCAGTGGCGGGTTCCAAACCACGCTCGGTGCAGGTGTGGCGAACTGGCTTAACGTCACCCCGTTGTCCACCGTGAAGGGTGTGAATGTTGAATTCCCAACCAACAACGATGCGCCGTCAGGTGATGCAGTCGTGCACCTGTTAGTGTACCGTAAGGGTGATCAGTTCCGCACGCTGTCCTTAGGTGCAACCACGTCTGGGGTGAACAGCCCAGCCGGTAACCGTGTAAACCTTGCGCTTTACGGTAACTGGCGAAAAGTCACTTCAAAAATCAACAGCTTCACGTTGGGTATCAACGAATCACGTTACACTACCGCGTCTTCGTTTGATAAGCTGAATCCGAAAATAACGTACAACCTCACCCGAGGTAGCAACATTGTTATTAACGGAACTGCCACCCTGCTCGGCTATACCATCAACTATACCCTCACTCTCGGTGCCGCGGCATCAACTCTGGCGATTACACGCACAGACACGAGTGAGACCAGCACAATCGACATCACCAGCCGTTTAGCGGATGCGGATATCGATATCGCGACGCTATTGAACTCACCGGCTACCCCGGTGTATTTCGGCGTGGGTGCTATGTTGAATAAGGCCATTCAGCTGAAGGTGAGTTATACCGCAGGGCAATTTACCGCTCAACACCGGTACACCTCCGCAATGGACTACCTGAACAACTACAGTGAGTTGGGCAGGGTTCGTCTTTACGAGGGTGCGTTTGCAGGCAGTGGCACAACGGAACTCAAGAAGAAGGTTATTGCTGATAACAACGCTGGTGCGGTCGGAGTAGGCGATGGGCTTCCGGGCTACATTAACTTCTCGGGAATGGAGCTTAAACAGAGTGGTAGCAATTATAAAGCTCTCGTGATTAGAGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
496eb98890ceb63de01ef3decb45eaa31487aa7007a4a84349ab51f543952e5e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_6 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank