Protein

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Genbank accession
XCO38835.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFSQPGGSVSKDVNKQSIARVLGVKMSDVAYLKAGLLVDSYKVLYDKTTQTCWYRGTATGTVTSWGIADDALTLVTASGSYTLSNADLRQTLNSSKGFGLVGQVPSFTALRSVVPTYAGQSILLRSHPAGWAAMNHGPVGGGEFIARAGTAVDDGGYICVPTGQTAYYWQRIPKDRGKVCATEFGLYDGAALDDILTNAINYCIKNSLGNLSVPALGPAGYTIAGGLEFVNSTNGLIIEGPGMATKGTSPVITHTGANIALTFKRTTQAQSLFNAVILKNFTIVGNALATAFVRFSDFYGGSVFDTVARDYTIGTVIDVYNDKGWTEVLRVDNVVVRTSQRGIWFHSNPASTDDQTLSFYGASITNFGFQHGITGASYGIYVGDGTRADNLYNCNIDMMGWWEVGGNSTALYAADKARVDGAANFRYDGFAANAITSSSQPCRLVRKAGTTGYVKLNCKNYKHEAGLGLTAGVTQLTIRPWLAIAEAVAGSGTPHPTLPAESIISVPGMKCKLTGTLFKGQNSVVSVVGLPAWHRYKVTTRCGLSSTAQQQYIVNIPNATNGGITTRTDSVPKAATNTNTTTTIDGTTATSVSTSSTTNSNKNFEPFYITNAGNLADNTYSTTNTMSFDIHLDGTQSNVVNDTYPVTIEIEAID
Physico‐chemical
properties
protein length:657 AA
molecular weight: 69693,29890 Da
isoelectric point:7,94935
aromaticity:0,09285
hydropathy:-0,08554

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 DC_0545
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50
DC_0717
ATT
75–210
DC_0717
XCO38835.1
1 657
Architecture
ATT
STR
ATT 1-210 | STR 211-656 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38835.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,9917
Central domain 194 483 291 0,9872
C-terminal 484 657 173 0,9908
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-483
C-terminal
484-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146021
[NCBI] 		3232201 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38835.1 [NCBI]
Genbank nucleotide accession
PP889471.1 [NCBI]
CDS location
range 143267 -> 145240
strand +
CDS
ATGAATCCACAATTCAGTCAGCCCGGCGGTTCCGTCTCTAAAGACGTGAACAAACAATCTATAGCACGTGTGTTAGGCGTCAAAATGAGCGATGTCGCTTATTTGAAAGCTGGTCTCCTCGTAGACAGTTATAAAGTTTTGTATGACAAGACGACTCAAACATGCTGGTATCGTGGTACTGCTACTGGTACAGTAACTTCTTGGGGTATTGCTGATGATGCACTTACTTTAGTTACAGCTTCTGGTTCCTATACATTAAGTAACGCAGATCTTCGACAAACCCTGAACTCAAGCAAAGGATTTGGGTTGGTTGGTCAGGTTCCGTCGTTTACTGCCCTGCGCTCTGTTGTCCCGACGTATGCAGGACAAAGTATCCTACTACGCTCCCATCCAGCAGGGTGGGCAGCCATGAATCATGGTCCTGTCGGTGGCGGGGAATTTATTGCCAGGGCTGGTACTGCCGTTGATGACGGTGGTTATATCTGTGTACCTACAGGTCAGACTGCATATTACTGGCAGCGTATTCCAAAAGATCGTGGCAAAGTCTGTGCTACAGAATTTGGTCTTTATGATGGTGCTGCTCTTGATGATATTTTAACGAATGCTATCAACTACTGTATTAAAAATTCACTTGGAAATCTTTCAGTTCCGGCACTTGGGCCTGCTGGATATACCATCGCTGGTGGTCTGGAGTTCGTAAACTCGACGAACGGACTTATCATTGAAGGGCCGGGAATGGCCACCAAAGGTACTTCACCTGTTATTACGCATACTGGTGCAAACATTGCTCTGACGTTTAAGCGTACTACACAGGCTCAGAGCCTATTTAATGCGGTCATTCTCAAGAACTTCACAATAGTCGGTAATGCTCTCGCTACTGCCTTCGTTAGGTTCTCTGATTTTTACGGTGGTTCAGTATTTGACACCGTGGCTAGAGACTACACCATTGGGACGGTGATAGATGTATATAATGACAAGGGATGGACTGAGGTTCTCCGGGTAGACAACGTCGTTGTCAGGACTTCACAGCGTGGGATCTGGTTCCACTCAAACCCGGCATCTACTGATGATCAGACGCTGTCTTTTTATGGAGCCAGTATTACCAACTTTGGCTTCCAGCATGGGATCACGGGGGCGTCATATGGTATCTATGTCGGTGACGGAACACGTGCAGATAACCTATATAATTGTAATATTGATATGATGGGGTGGTGGGAAGTCGGTGGTAACAGCACGGCACTTTATGCAGCTGACAAAGCACGTGTTGATGGGGCTGCTAATTTCCGGTACGACGGTTTTGCCGCAAACGCGATTACATCAAGTTCTCAACCGTGTCGCCTTGTACGGAAGGCTGGTACGACAGGCTACGTTAAGCTGAACTGTAAAAACTACAAGCACGAAGCTGGACTTGGTTTAACTGCTGGAGTCACTCAGTTAACGATCCGCCCGTGGTTAGCCATCGCAGAAGCAGTTGCTGGATCGGGCACTCCGCATCCTACACTACCTGCTGAGAGCATAATCAGTGTACCGGGGATGAAGTGCAAGCTAACTGGTACATTGTTCAAGGGGCAGAACTCTGTAGTATCCGTAGTGGGCCTACCTGCATGGCACAGATACAAAGTAACTACTCGTTGTGGGCTGTCCAGTACAGCCCAGCAACAATACATAGTTAATATCCCTAATGCCACCAACGGGGGTATCACTACCCGCACTGATTCAGTACCGAAGGCGGCCACTAACACCAATACAACCACAACAATTGATGGTACGACTGCAACGAGTGTGTCAACGTCGTCAACGACAAACTCAAACAAAAACTTTGAGCCGTTCTACATCACCAACGCGGGTAATCTTGCTGATAATACCTACAGCACCACAAACACGATGAGTTTTGATATTCATCTGGATGGTACACAATCGAACGTCGTTAATGACACATACCCTGTAACCATTGAAATTGAAGCTATCGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e5729303a10d7292102bf9f670ca28759528098345985d38a017024725b6472
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank