Protein

View in Explore
Genbank accession
CAB4220320.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MTDFTQPINTSLVSTVLETLRNRDTSIAKMDFASDTNFTSGFLRYNRVNRVFEEFDGSVWVEQRVEPAGIVKSFAGTTAPRGHILCDGGAISRTAYPSLFTAIGTTYGAGNGSTTFNVPNLSGRFPLGKATTGTGSVLATTGGAIDHNHTTPAHYHGMGSGADLNVTSSGAHTTTINISHGHNATTVAGASGVSIANNTTGATNLTINDQGHFHSVPGVGTTTEGGGQNTGNSPTKFAKGRITNNGPTGDHNGSTFSATSNISITNGNHAHPVSITDPGHGHTTTVEALVNPYYAQDYSGVHTHAAANFAGRIGLVSGGLDGNTNMLGGTNNPPFLVLNYIITI
Physico‐chemical
properties
protein length:344 AA
molecular weight: 35475,38660 Da
isoelectric point:6,47484
aromaticity:0,06977
hydropathy:-0,25640

Domains

Domains [InterPro]
DC_0017
STR
2–342
DC_0017
IPR037053
ATT
62–121
IPR037053
SSF88874
STR
65–203
SSF88874
IPR011083
ATT
69–126
IPR011083
CAB4220320.1
1 344
Architecture
STR
ATT
STR
STR 2-61 | ATT 62-126 | STR 127-342 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4220320.1
1 344
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9695
Central domain 62 260 200 0,0036
C-terminal 261 344 83 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-260
C-terminal
261-344

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4220320.1 [NCBI]
Genbank nucleotide accession
LR797490 [NCBI]
CDS location
range 7360 -> 8394
strand -
CDS
ATGACCGATTTCACACAACCAATAAATACTTCACTAGTCTCAACGGTGCTGGAAACCCTACGCAATCGAGACACCTCTATAGCAAAAATGGATTTTGCAAGTGATACAAATTTCACTTCTGGATTCTTGCGATACAACAGGGTGAACAGGGTTTTCGAGGAATTTGATGGCTCTGTCTGGGTAGAGCAACGGGTTGAGCCAGCAGGAATCGTCAAATCGTTTGCGGGTACTACTGCACCAAGAGGGCACATACTCTGTGACGGCGGCGCTATCAGCCGAACTGCCTATCCTAGTTTATTCACTGCAATCGGGACAACATACGGAGCGGGTAACGGCAGCACTACTTTTAACGTGCCGAATCTCTCTGGTAGATTCCCTCTCGGAAAAGCTACAACGGGAACGGGTTCAGTTCTAGCAACAACAGGCGGCGCAATAGACCACAATCACACAACCCCAGCGCACTATCACGGAATGGGAAGCGGTGCGGATTTGAATGTTACCAGCAGCGGCGCTCATACTACTACGATAAACATTTCTCATGGCCATAACGCAACAACCGTCGCAGGAGCTTCGGGAGTTTCTATTGCTAACAACACAACAGGGGCAACGAATTTAACTATAAACGATCAAGGTCATTTTCATTCTGTTCCTGGGGTGGGAACTACGACAGAGGGTGGCGGGCAAAATACAGGCAACTCACCAACTAAATTTGCAAAGGGTCGGATCACTAACAACGGGCCAACAGGGGATCACAACGGATCAACCTTCTCAGCCACATCAAACATCTCAATTACGAACGGAAACCATGCTCACCCAGTCTCAATTACTGACCCTGGGCATGGGCACACAACCACAGTCGAGGCGCTTGTAAACCCCTATTACGCTCAGGACTATAGCGGTGTGCATACGCACGCAGCAGCTAATTTTGCGGGCCGAATTGGGCTAGTTTCGGGGGGCTTAGACGGAAACACAAATATGCTAGGCGGTACTAATAACCCTCCGTTTCTTGTCCTGAATTACATCATTACGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
83b96ecb202056e6053303b32886cc91a24d421620412332ef06c1add0d7badd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5834
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50