Protein

View in Explore
Genbank accession
XLZ23569.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPNIIKPSGINLLWAAGGTKTDPGQSKTDLGWVVELPPYQYQNWLDNRQDTFIAHINQHGIAEWDSETEYQGNLSYTQGTDGLIYKCIQTNTNRNPTNPVNNIYWALAFETYGSVAVVQTALNTHIANYQTLTGLTNLTVARNNLDVFSKAESDNRFAALLGNAANQFRVANATLSNHAVPLGQLNSLLTASTEVAAGVIQIATVGEVETGTNNTKAITPAKGQAVYLKKSQNLNDLPNKATARSNLGLADTATIPSSTFMRGTNNLSELTNVPVARTNLGLGTAATQPVAFWLQTANNLSDLTNAATARNNLGLTAMATADPNAIMFKTQNLAGLTDVAAARANLGLSDSGLYPSNTWLIRGNNLGDLTNAQTARNNLGLGGAATLNVFGAGVGSFNYTNVKGTSGYTYLPNGMIMQWGQGPALNDDQGTTVGLHVAMNIMTVQVTGLGVATSGVGPCFLTDAWTTSTFAVYNNYNSGPSRPFTWFAVGFA
Physico‐chemical
properties
protein length:492 AA
molecular weight: 52143,56920 Da
isoelectric point:5,95811
aromaticity:0,08130
hydropathy:-0,14573

Domains

Domains [InterPro]
DC_2128
STR
1–269
DC_2128 DC_1977 G3DSA:2.60.40.3940
DC_0362
RBD
317–490
DC_0362
XLZ23569.1
1 492
Architecture
STR
STR
RBD
STR 1-269 | STR 291-326 | RBD 327-491 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage XD2
[NCBI] 		3348352 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ23569.1 [NCBI]
Genbank nucleotide accession
PQ288046.1 [NCBI]
CDS location
range 13805 -> 15283
strand +
CDS
ATGCCTAACATTATCAAACCGTCTGGCATTAACCTGTTGTGGGCTGCTGGTGGTACTAAAACTGATCCGGGTCAGTCAAAGACTGACCTCGGTTGGGTTGTAGAACTTCCACCATACCAATACCAAAACTGGCTAGACAACAGACAAGACACATTTATCGCACACATCAACCAACATGGTATTGCTGAGTGGGATAGTGAAACTGAGTACCAAGGAAACTTGTCGTACACTCAGGGTACGGATGGCCTGATTTACAAGTGCATCCAAACCAACACAAACCGCAACCCAACTAACCCAGTGAACAACATCTACTGGGCATTGGCGTTTGAGACATACGGGAGCGTTGCTGTTGTTCAGACAGCGTTGAACACTCACATTGCAAACTACCAGACACTGACTGGGCTTACAAACCTGACAGTGGCTCGTAACAACTTGGATGTGTTCTCCAAAGCTGAATCTGACAACCGATTCGCTGCATTGCTTGGTAACGCCGCCAACCAGTTCCGTGTAGCCAACGCCACTCTGTCAAACCACGCTGTTCCACTGGGACAATTGAACTCGTTGCTAACAGCTTCTACGGAAGTTGCTGCTGGTGTAATTCAAATTGCCACAGTTGGTGAAGTGGAGACTGGAACAAACAACACCAAGGCAATCACACCTGCCAAAGGTCAAGCTGTGTACTTGAAGAAGTCGCAGAACTTGAACGACCTGCCAAACAAGGCAACAGCACGTTCAAACCTTGGACTTGCTGACACTGCCACCATTCCTTCAAGTACGTTCATGCGAGGAACAAACAACCTCAGTGAATTGACAAACGTCCCTGTTGCACGCACCAATCTTGGACTTGGCACAGCTGCAACACAGCCTGTCGCATTCTGGTTGCAAACTGCCAACAACTTGTCTGACTTGACCAACGCTGCCACTGCACGTAACAACCTCGGGTTGACTGCTATGGCTACTGCTGATCCAAACGCAATCATGTTCAAGACTCAAAACTTGGCAGGATTGACAGACGTTGCAGCTGCTCGTGCAAACCTTGGGTTGTCTGACTCTGGTCTATACCCAAGCAACACTTGGCTGATCCGTGGAAACAACCTTGGCGATTTGACAAACGCACAAACTGCACGTAACAACTTGGGACTTGGTGGTGCTGCCACACTGAACGTATTCGGTGCTGGTGTTGGAAGTTTCAACTACACCAACGTGAAGGGTACTTCTGGTTACACCTACCTTCCAAACGGAATGATTATGCAGTGGGGCCAAGGTCCAGCACTGAACGACGACCAAGGTACAACAGTTGGCTTGCACGTTGCTATGAACATCATGACAGTTCAAGTGACTGGTCTTGGTGTGGCAACAAGCGGTGTTGGTCCTTGCTTCCTGACAGATGCGTGGACAACCTCAACATTCGCTGTCTACAACAACTACAACAGTGGCCCTAGCCGTCCATTCACATGGTTTGCTGTAGGGTTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcda232f2effc2af2f7cdf20b892ef1e658de504ba75d989ffe6731044f6afda
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7504
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50