Protein

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UniProt accession
A0A8S5M892 [UniProt]
Protein name
Collagen I alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANNFVDFQFGFKLYSANALDYRYVGKTKAFLNELIDLEATYPGLRVYIEDDNTFYAYLKNAEGVYEFQEDKGKEGPQGPKGERGLTGATGQPGYTFTPAISDTGELSWTKSKGEGGDVPAPINIKGATGPQGPTGPQGPKGDPGTGVTIKPDKASCLVVGDSYIDESTGNLMMLTTLPNTFKDLGPIRGPQGLQGEKGETGAQGPIGPQGEQGPAGPQGEQGPAGPQGPKGETGEQGPKGDKGEPGAQGEQGIQGIQGEQGIPGAEGKSAYQIAKDAGFVGDEASWLASLKGEKGEQGTPGVNGTNGKDGTAATIQIGTVTSTSGTASVTNSGTDKAAVFNFNLPKGTDGKTPNITINATTLDPGNNVTVQKTGDVDAPVFTFGIPRGADGKNGEKGATGDKGDTGAPGAAAAITGATAEIGENDPTKPSEVAVTAEGNNSARSFKFVFKNIKGNKGDKGEDGKSIQVKENADACTVLGEGYIDDNGHLQILTTTDPRAFKDVGEIRGPQGEQGLQGEQGLKGDKGDKGDTGAQGEKGDKGEPGTTFTPSVSSDGILSWTNDGNKQNPQEINIKGPKGATGDKGAKATVSVNETITQLAYDASPIVTNSVDEITNNNQLTFSFPRSPIFKPSINDGVLSWSKADSGTVQQPEAFNITEQLIPPLVCGIDAYRATRNGKLCMKASANKQHLPNVATFFNRTPVEGDRCLFYSYVQEGKEEASTDPRIYLGVFKEELQIEAEDYWYFEVPSGMAATTPSLKGDKGKPGKDGKNARLTINSSSTASAEMDKVIISGYAGANTEPAVSINSTLTDVETASPVLHLAYTFTNMIGNGIKSISYTASDADSGENKLTFKTFAKMNVGTDEDPTYSDTEEIIIKNGAGISAFTYPTNGEITPSTANKWATAPVYVTLSNGDTKTLPMPVITPVKGTTTFEIANSTSEIGIESAFGPVNTTNGTVPVNFTMKLFEVTASADEADITTGPISATNTFYLHTKQGSSQAITIGLDDGDLTNE
Physico‐chemical
properties
protein length:1013 AA
molecular weight: 105558,97510 Da
isoelectric point:4,66969
aromaticity:0,06811
hydropathy:-0,54906

Domains

Domains [InterPro]
DC_2298
STR
25–157
DC_2298 IPR008160 DC_0541
IPR050149
Unmapped
72–768
IPR050149
G3DSA:1.20.5.320
STR
125–178
G3DSA:1.20.5.320 DC_1725 G3DSA:1.20.5.320
DC_1065
STR
141–244
DC_1065
A0A8S5M892
1 1013
Architecture
STR
RBD
STR
RBD
STR 25-386 | RBD 480-517 | STR 518-568 | RBD 569-1003 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctrgt10
[NCBI] 		2826479 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD78187.1 [NCBI]
Genbank nucleotide accession
BK014839 [NCBI]
CDS location
range 79920 -> 82961
strand -
CDS
ATGGCAAACAATTTTGTTGATTTTCAATTTGGATTTAAGCTCTACTCCGCTAATGCACTAGATTATCGATATGTAGGCAAAACAAAAGCTTTTTTAAATGAATTGATTGATTTAGAAGCTACTTACCCAGGTTTACGTGTTTACATTGAAGATGACAACACTTTCTATGCATATCTAAAAAATGCTGAAGGTGTTTATGAATTCCAAGAAGACAAAGGAAAAGAAGGCCCACAAGGCCCTAAAGGTGAAAGAGGTCTTACAGGAGCTACAGGTCAACCCGGATATACTTTTACTCCTGCAATTTCTGACACAGGAGAGCTTAGCTGGACTAAATCTAAGGGAGAAGGAGGAGATGTTCCTGCTCCTATAAACATTAAAGGAGCTACTGGCCCACAAGGTCCTACTGGACCTCAAGGCCCTAAGGGCGATCCTGGTACTGGAGTAACAATAAAACCTGATAAAGCGTCCTGTCTTGTTGTAGGTGATTCTTATATCGATGAAAGCACAGGTAATTTGATGATGCTAACAACTCTGCCGAACACGTTCAAAGATCTTGGACCTATAAGAGGTCCACAAGGTTTACAGGGCGAGAAAGGTGAAACCGGAGCACAAGGACCTATCGGACCACAAGGAGAACAAGGACCTGCTGGACCACAAGGAGAACAAGGACCTGCTGGTCCACAAGGTCCCAAAGGCGAAACTGGAGAACAAGGACCTAAAGGTGACAAAGGCGAACCCGGCGCGCAAGGCGAGCAAGGAATACAAGGTATTCAAGGAGAACAAGGTATTCCTGGTGCCGAAGGTAAGTCTGCCTATCAGATAGCGAAAGATGCTGGTTTTGTAGGAGATGAAGCATCTTGGCTCGCTTCTCTTAAGGGAGAAAAAGGTGAGCAAGGTACTCCTGGTGTAAATGGCACTAATGGTAAAGACGGAACTGCAGCAACTATTCAAATTGGCACTGTCACTTCGACTTCTGGAACTGCTAGCGTTACAAACAGCGGTACTGATAAAGCAGCAGTATTTAATTTTAATTTGCCAAAAGGCACAGATGGTAAAACTCCAAACATCACAATAAATGCAACAACGCTGGATCCTGGCAACAATGTAACAGTTCAAAAAACAGGTGATGTCGATGCTCCTGTATTTACTTTTGGTATTCCAAGAGGTGCAGACGGTAAAAATGGAGAAAAGGGTGCAACTGGAGATAAAGGTGATACAGGAGCCCCTGGTGCAGCTGCTGCAATAACAGGAGCAACTGCTGAAATAGGTGAAAATGATCCTACAAAACCTTCTGAAGTTGCTGTTACAGCTGAAGGAAATAACTCTGCTAGATCCTTCAAATTCGTATTTAAAAACATTAAAGGAAATAAGGGCGACAAGGGTGAAGATGGAAAATCCATACAAGTAAAAGAAAATGCTGATGCTTGTACTGTATTAGGAGAAGGATATATTGATGACAACGGTCATTTACAGATCCTTACGACAACTGACCCTAGAGCTTTTAAAGATGTTGGAGAAATTAGAGGACCACAGGGCGAGCAAGGTCTTCAGGGTGAACAAGGGCTCAAAGGCGATAAAGGAGACAAGGGTGATACTGGCGCGCAAGGCGAAAAGGGTGACAAAGGCGAACCCGGAACAACTTTTACTCCGAGTGTTTCATCTGATGGTATCCTTTCTTGGACGAATGACGGCAACAAACAAAATCCCCAAGAGATTAACATAAAAGGACCTAAGGGTGCCACTGGCGATAAAGGTGCTAAGGCAACTGTGTCTGTAAATGAAACAATTACGCAACTTGCATATGATGCTAGCCCTATAGTTACAAACAGTGTAGACGAAATCACAAATAATAATCAGCTTACGTTCTCGTTCCCAAGAAGTCCAATTTTCAAGCCCAGTATAAATGACGGTGTTTTGTCTTGGAGTAAAGCAGATAGTGGTACTGTACAACAGCCAGAGGCTTTTAATATTACAGAACAGTTAATTCCGCCTTTGGTATGTGGTATTGATGCATACAGAGCAACGCGCAATGGTAAACTTTGTATGAAAGCATCTGCTAACAAACAGCATCTTCCTAATGTTGCAACATTCTTCAATCGTACTCCTGTAGAAGGAGATAGATGTTTGTTCTATTCTTATGTACAAGAAGGAAAAGAAGAAGCTTCGACGGATCCAAGAATATATTTAGGGGTATTTAAAGAAGAATTACAAATAGAGGCAGAGGATTACTGGTATTTTGAAGTTCCTTCTGGAATGGCTGCTACGACGCCCTCACTTAAGGGAGATAAAGGCAAACCAGGCAAAGATGGCAAAAATGCTAGATTAACAATAAATAGTTCTTCTACCGCCTCAGCCGAAATGGATAAAGTTATAATTTCTGGGTATGCTGGAGCAAACACAGAACCTGCAGTAAGCATTAACTCAACGCTTACAGATGTAGAAACAGCTTCTCCTGTTCTTCATTTAGCTTACACGTTTACTAACATGATTGGCAATGGTATTAAAAGCATCTCCTATACTGCTTCTGATGCTGATTCAGGAGAAAATAAATTAACGTTTAAAACCTTTGCTAAGATGAATGTTGGTACAGACGAGGATCCTACCTATAGTGACACTGAAGAAATAATTATCAAAAACGGAGCGGGTATTTCTGCCTTTACGTACCCAACAAATGGAGAAATTACTCCCTCAACTGCAAATAAATGGGCTACAGCTCCTGTTTATGTAACTTTAAGTAACGGCGATACAAAAACATTACCGATGCCTGTAATAACTCCTGTTAAAGGAACTACAACATTTGAAATTGCAAATAGCACTTCTGAAATTGGAATTGAGTCAGCATTTGGCCCAGTAAATACTACCAATGGAACGGTGCCTGTCAACTTTACAATGAAATTGTTTGAAGTTACTGCTTCCGCAGACGAAGCTGACATAACAACAGGACCAATAAGCGCTACAAACACTTTCTATTTACATACTAAACAAGGATCTAGTCAAGCAATAACTATAGGCCTTGACGACGGTGATCTTACTAACGAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
ad2dd3f347d07f66ba54c106e5e3d85b5f210d727ba644e66e0d18c3c37a48fd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4327
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50