Protein

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Genbank accession

AJA73233.1 [GenBank]

Protein name

host specificity protein J

RBP type

Evidence RBPdetect2

Probability 0,93

Protein sequence

MRIYGAKGGGGSSHTPIEAPETGRSKQIVNIVELLCEGEIEGLVDGFKSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQDVLDGYDSSQNEVNVGVEIKKKNGAIVRTVTDERINRLRLTLGVRSLFHQNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQYLESVVFDNLPPVPFNISVERLTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGISFDSEYFNNIPTRNYLIKAKKVKVPSNYDPVKRTYTGFWDGTFKVAWTNNPAWEIYDLAPILSKMLGVEISFDKWALYDVSRYCDQLVPDGMGGQEPRFTCDVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVSGFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDDEEIKKHGLNLSQITAFGCTSRGQAHRTGKWILETEKREKETITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAINGRKVTLDREISIDNASYFTYINGEATHSTIKIQSVNGKEITLDSTPTGLETYGVWSLSTKQISSGLYRSISIVENADGTNTITALQHEPQKEAIVDNSAHFVETARTLYKAPQINAVEVSTGYDGKLYITGDISSGDGKLTYDIKITKDGNLYQYKKGLSDPNIELSDLPNGDYTVIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAAETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRHTRGINVGPFYQQQGVRGQTAVDLDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTVANLTDKGTKLASSQVYNQADGKLYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQEITNRQDAVTAEANNRTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISAVTAKADNALSGLEEEKTARANADKAESQAREALTARMGAAESNIVTIQRTVANNAQSISEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNGPVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETEFNHYKLTFKAPFTTQQGYVLIGFRQTSTEQFVEFHSVKLEKGNVATDWTPAPEDVESAVSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKAETNFNAKITEEKKARVDADKVNADKLTDITSRVANAESTITNFQSTKANKSEVASIAQQNLQSIWRTDAQSAVDALKIGGANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVTQAGTGHFGVTQGTQKATTRIRQGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRLPTLPLTASLSQRPKVTFTAPWTSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGWTPTAKDIDDKVSAVQSNLTAYQAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVTELNQTTVTTLRDLTARTKTTEGSLSRLETAKANKTEVASIAQSSLQSIWKADAKSAVDSLSIGARNLLIDSTYNQHINYNTKMSSITRTVYRGNMLIRLGMLGGAGVAGIVQAPAAQVSNIRQGQEYTLSLNVQGTAGIQKTGLNYVFLMRADGANQRLATIPVIASLLNRPKITFTAEWTSERAYLLVGVNGTYETTDWLAFHSVKLEKGNVATDWTPAPEDVDSAVSAVSAKIDTIQETLANADSALSSRIDTVNASVGSNSSKITQVSNAVASVDGKLSATHTIKTETIAGGRKAIAGIAFGATADNRNAESSVIVMADKFEVVKNAQDGTPVRLFGVVENKVAINGNLIATGSISGDHINANSVRTAVLTAGAIKTEHLAAGQISADKLAIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRTIFNRNEQDNYGLKNGGLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRGQAKLVIENIEKPGGAYLGRIGNSEVITGYSAHQGEFKNMKRVKVVFTAPTSGCIRFALRLDNIQGKANPFLFARRPMLEEASDNVTDITQPSPWQNAGVTAIHGGSIVTNTVTAQQIAANTITANEIAAGTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGAITAGSININNRFKVSNAGVVEMRANSGNVGMVMNNNSIIVYDEQGRVRVKMGKL

Physico‐chemical properties

protein length:	2241 AA
molecular weight:	243418,21160 Da
isoelectric point:	7,35885
aromaticity:	0,07184
hydropathy:	-0,33280

Domains

Domains [InterPro]

DC_0463
STR
1–1077

DC_0463 DC_2057 Coil DC_0515

IPR053171
Unmapped
3–1026

IPR053171 IPR008979 DC_2057 IPR015406 G3DSA:2.60.120.260

IPR055385
ATT
90–209

IPR055385 IPR032876 DC_1502

AJA73233.1

1 2241

Architecture

STR

ATT

STR

ATT

STR

RBD

STR

STR 1-89 | ATT 90-209 | STR 210-327 | ATT 328-490 | STR 491-1171 | STR 1186-1757 | RBD 1758-1912 | STR 1913-2240 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0463	STR	DC_0463	1	1077	Novel HMM	DC_0463	Central	Low	Positional only	26 proteins / 26 hits
IPR053171	Unmapped	-	3	1026	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	90	209	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	328	490	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR008979	STR	IPR008979	1032	1171	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
DC_2057	STR	DC_2057	1186	1484	Novel HMM	DC_2057	Central	Low	Positional only	53 proteins / 53 hits
DC_2057	STR	DC_2057	1463	1757	Novel HMM	DC_2057	Central	Low	Positional only	53 proteins / 53 hits
Coil	Unmapped	-	1500	1520	Coils	Coil	-	-	-	-
DC_0515	RBD	DC_0515	1694	2006	Novel HMM	DC_0515	C-terminal	Low	Positional only	63 proteins / 63 hits
IPR015406	RBD	DC_0135	1781	1899	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1913	2084	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_1502	STR	DC_1502	1946	2240	Novel HMM	DC_1502	Central	Low	Positional only	9 proteins / 9 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Mannheimia phage vB_MhS_535AP2 [NCBI]	1572743	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Mannheimia haemolytica [NCBI]	75985	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Genbank protein accession

AJA73233.1 [NCBI]

Genbank nucleotide accession

KP137433 [NCBI]

CDS location

range 17533 -> 24258
strand +

CDS

ATGCGTATTTACGGAGCAAAAGGTGGTGGCGGCAGTAGCCATACCCCGATTGAAGCACCGGAAACCGGTCGCTCAAAACAGATTGTGAATATTGTGGAATTGCTGTGCGAGGGCGAAATTGAAGGCTTGGTTGATGGCTTTAAATCGATTTACCTAGACGGCACGCAGATCCAAAACGATGACGGCACCTATAATTTTAATAATGTGAGCGGTCAGCTAAATGTCGGTACGCAAGATCAAGATGTGTTGGACGGTTACGATAGCTCACAGAATGAAGTGAATGTGGGTGTTGAGATTAAGAAAAAGAATGGGGCTATTGTCCGCACCGTAACTGATGAACGAATTAACCGCTTGCGTTTAACGTTGGGAGTAAGGTCATTATTCCACCAAAATAATCAAGGCGATACCAATACCACCAATGTTGATTTAAAAATCACGATTGGCACACGGCAATATTCGCATAGCTTTAACGGCAAATACAGCTCGCAATACCTTGAATCTGTGGTGTTTGATAACCTGCCGCCTGTGCCATTTAATATCTCAGTTGAGCGTCTAACCGAGGATAGCAATTCGCAACGCTTACAAAACGGTACAATTTGGAGTAGTTACACCGAAATTATCGATACCGAGTTTACCTACCCTAATTCAGCGGTTGCCGGTATCAGTTTTGATTCGGAGTATTTTAATAATATCCCGACCCGAAACTACCTAATTAAAGCGAAAAAAGTCAAAGTGCCAAGCAATTATGATCCAGTTAAACGCACTTACACCGGCTTTTGGGACGGCACATTTAAAGTTGCGTGGACGAACAACCCTGCTTGGGAAATTTACGATTTAGCTCCGATTTTAAGCAAAATGCTTGGGGTTGAAATCAGCTTTGATAAATGGGCGTTGTATGACGTCTCTCGCTATTGCGATCAGCTTGTGCCGGACGGTATGGGCGGACAAGAGCCACGTTTTACCTGTGATGTATGGCTCACGGAAGTTAAAACTGCCTATGATTTATTAAATGATTTCTGCTCGGTATTCCGTGCGATTCCGATTTGGACCGGCACGGAAGTCTCCGTGATTATCGACCGTCCTCGTGATCCGGTTTGGACTTATACCAACGCTAATGTAGTCAGCGGTTTTGAACGCTCATATTCTGCCCGCAAATCTCGCCATAATGCGGTACAAGTGACCTATTCGGATAAAACGAATGGCTATGAAAGTGCGATTGAATATGTCTCTGACGATGAAGAAATAAAAAAGCACGGCTTAAATTTAAGTCAAATTACCGCCTTTGGTTGCACCTCTCGGGGACAAGCACACCGTACCGGTAAATGGATTTTAGAAACCGAAAAACGAGAAAAGGAAACCATTACCTTTACCGTTGGACGTGAGGGCTTAATGCACTTACCGGGCGATATTATCCGTGTAGCCGATAGCCATTATGCCGGCACGGAAATTGGCGGACGAGTGTTGGCGATTAATGGGCGAAAAGTTACCCTTGACCGTGAAATTAGCATTGATAACGCCAGTTATTTTACTTACATCAACGGTGAGGCGACACACTCAACCATCAAAATCCAATCTGTAAACGGCAAAGAAATTACGCTGGATAGTACACCAACCGGCTTAGAAACCTACGGTGTTTGGTCGTTATCGACTAAACAAATCAGCTCTGGATTATATCGCTCAATCTCGATTGTCGAAAATGCGGACGGCACAAACACTATCACAGCGTTACAACACGAACCGCAGAAAGAGGCAATTGTTGATAACTCCGCTCACTTTGTGGAAACGGCTAGAACACTCTACAAAGCTCCACAAATTAACGCAGTGGAAGTCTCGACCGGTTATGACGGTAAGCTCTACATTACCGGTGATATTAGCTCCGGTGATGGCAAGCTAACCTATGATATTAAAATTACCAAAGATGGCAATTTATATCAATACAAAAAAGGCTTAAGCGATCCGAACATTGAACTAAGTGATTTACCTAACGGCGATTATACCGTCATTATTTACGGCAAAAACGCCAAAGGGCAAATCGTCACCGAAAAAACACAAACCTTTACTATTGATCGACCTCCAGCTCCGACCGGTGTAGTAGTAACAGGTGGATTAGGGCAAATTACCCTCGAATGGGATTGGGTAAATGAGGTTACGCAAACCGAGATTTTCGCGGCCGAAACCGATAATTTCGCCCTTGCAAAAAAAATCGCAAAAGTGACCGCTAGAACCTACGCTCACACACTAAAAGGTAACAAGGTTGTACGCTATTATTGGCTACGTCATACCAGAGGCATTAATGTCGGACCGTTTTATCAACAACAGGGGGTAAGAGGACAAACAGCGGTTGATTTGGATGCTCGATTAACCGAATTAAACACTCAGTTATCACGCAATATTGTTAATGAGGTTTTTGATGTTGCTGCACCGGCAAGAGGTTTAGAATTAGTGAAAACAGTCGCTAATTTGACCGACAAAGGTACTAAACTGGCGTCATCTCAAGTTTACAATCAGGCTGACGGCAAGCTCTATACTTGGAACGGTACAGCATACTCAGCTACAGTGGCTGCGGAAGATGTTACCGGCAAATTATCAAAATCTAAAATTGATACGTCCCTTATTTCGCAATTAACAGGTGCAGATAACACCGCAAATTTGGCAAGAAGATTAGCGGAAACAGCTCAAAGCAACATTAACCAAGAGATTACTAACCGACAAGATGCCGTTACTGCCGAAGCAAATAACCGTACTAAAGCCATTCAAGCCGAAAGTGCGAATTTAACGAAAAAAATTCAAGCTGAAGCAACCGCTCGTGGGGCTGCTGTTACACAGTTACAAAATGTTGATGCTCAACAAGCACAGTTGATTTCTGCTGTCACAGCAAAAGCTGATAATGCTCTTTCAGGCTTGGAAGAAGAAAAAACAGCACGAGCAAACGCCGATAAAGCGGAGTCTCAAGCACGTGAAGCATTAACAGCAAGAATGGGAGCAGCTGAAAGCAATATCGTAACTATTCAACGTACGGTAGCAAATAATGCCCAAAGCATTAGTGAAGTCAGTCAGAATTTAAATGCTAAGATTGATAATATTAATATCGGCGGTCGGAATTTATTAAGAGACAGCGAGTTCAATGCGTACAATAAATGGGGTAGCCCACAAATTGAATTTGCTGAAAATGCAAATCGCCGAACTATCAAAGTAACCTCAACAGGTACTAACGGTCCTGTTGGTATTGTTTCATCTAATCGCCATTCCACATCTTATTTCCAACAAGGAGAAACTTATACACTCTCATTATTTGCTCGAGGAAGTAAGGCACTAGACTATCTCTATCTAATGCGTCAAGATGGGAATAACGTTAGATTACCAGTGATTAACGTTGCCTCTGAAACTGAGTTTAATCATTACAAACTCACGTTCAAGGCTCCTTTTACCACGCAACAAGGTTATGTCTTAATCGGTTTTCGGCAAACCAGCACAGAGCAGTTTGTTGAGTTTCACAGCGTCAAACTTGAAAAAGGCAACGTAGCCACAGACTGGACACCAGCACCGGAGGATGTGGAGAGTGCGGTTAGTGCTGTTTCGGCTGATTTAACGAGTTATAAACAAACTCAAGCGGCTACCGATTCAGCACAAGCACAGCAACTTAATCAGTTATCTGTGAACTTGACCAAAGCAGAGACTAATTTCAACGCCAAAATCACGGAAGAAAAAAAAGCTCGTGTTGATGCAGATAAAGTGAATGCAGATAAACTCACAGACATAACAAGCCGTGTTGCAAATGCGGAATCAACTATTACCAATTTCCAATCAACCAAAGCGAATAAAAGTGAGGTGGCAAGTATTGCCCAGCAGAACTTACAGAGCATTTGGCGCACCGATGCGCAAAGTGCGGTGGATGCCTTGAAAATCGGTGGTGCAAATCTACTGGTTGATAGTGAGTATTTGACGACAGCCCGTTGGGGCGGTAGCTCACGAGTGGCAAGCTCGCAATATGGTGATCGTCGCTTGACTCAAGTGTTTGTGACCCAAGCAGGCACAGGGCATTTTGGTGTGACTCAAGGCACACAAAAAGCCACTACGCGTATTCGTCAGGGTGAAACCTATACCTTGTCACTAAATGCGCAGGGGACGGCAGGTTTTACCCGCACAGGGTTAAACTATGTGTACCTTATCCGCGAAGATGGTGGCAATTTTAGATTGCCAACTTTGCCGCTTACTGCATCATTGTCCCAACGCCCTAAAGTGACATTTACTGCGCCGTGGACGAGCAATCAAGTTCGGTTACTGATTGGCGCAAATGGCATATTTGAGGCGACAGACTGGTTCGCATTTCACAGCGTTAAGCTCGAAATGGGTAATGTTGCCACAGGCTGGACACCAACCGCCAAGGATATTGACGACAAAGTATCAGCGGTTCAGTCCAACCTCACCGCTTATCAGGCGGCACAAGCTAAAGCAGATCAAGCCAAAGCTACGCAGATTTCGGGGCTCACAACCCGAATGGGGGCAGCGGAAAGTAACCTCACTCGCACCGAACGGGCAGTGACGGAACTTAATCAGACAACGGTGACGACACTGCGTGATCTAACCGCGCGCACCAAAACAACGGAAGGTTCGCTCTCTCGTTTGGAAACCGCCAAAGCAAATAAAACTGAGGTGGCAAGTATTGCTCAAAGCTCCTTACAGTCAATTTGGAAAGCTGATGCAAAATCTGCCGTTGATTCACTTTCTATCGGTGCAAGGAACTTACTGATAGACAGTACTTACAACCAACACATCAACTACAATACAAAAATGTCATCAATCACACGCACAGTCTATCGCGGCAATATGTTGATACGACTCGGAATGCTTGGTGGCGCAGGTGTGGCCGGTATTGTACAAGCACCAGCCGCTCAAGTAAGTAATATCAGACAGGGTCAAGAGTACACACTTAGCCTGAATGTACAGGGTACAGCCGGCATACAAAAAACGGGGCTCAACTATGTATTCTTGATGCGTGCTGATGGGGCTAATCAACGGTTAGCAACAATACCTGTTATAGCCAGCCTATTAAACAGACCTAAAATAACCTTTACTGCCGAATGGACAAGTGAGCGAGCCTATCTGCTTGTTGGTGTAAATGGTACTTATGAGACCACAGATTGGTTAGCGTTTCACAGCGTCAAACTTGAAAAAGGCAACGTAGCCACAGACTGGACGCCAGCACCTGAAGATGTGGACAGTGCGGTTAGTGCAGTTTCGGCTAAAATTGATACTATTCAGGAGACTTTAGCGAATGCCGACTCTGCATTAAGCTCTCGCATTGATACGGTCAATGCCTCAGTCGGATCAAACTCATCTAAAATTACCCAAGTCAGCAATGCGGTAGCAAGTGTGGACGGCAAATTATCTGCTACCCATACCATCAAAACCGAAACCATTGCCGGTGGACGCAAAGCGATTGCCGGTATTGCATTTGGTGCAACGGCAGATAACCGTAATGCGGAATCTTCTGTGATTGTGATGGCAGATAAATTTGAGGTCGTGAAAAACGCCCAAGACGGCACGCCAGTAAGACTATTTGGCGTGGTAGAAAATAAAGTAGCGATTAATGGGAATTTAATCGCAACAGGCTCGATTTCAGGAGACCACATCAATGCAAATTCCGTCAGAACTGCTGTATTGACTGCAGGAGCGATTAAAACGGAGCATTTGGCAGCAGGGCAAATATCGGCGGATAAGTTAGCGATTGGGCTAGGTGGGAATTTGCTGGTTAATCCTATTTTTGCAACACCCGATTTGTCAATAGCTCCGTTTGGCTGGAACTACTGGCGAGGAGAAGTTGGTGATCGGCTAAATATTGACACCCGTACTATTTTCAATAGGAATGAACAAGATAATTACGGACTAAAAAATGGAGGACTACCAAATGAGTTAGTATTTTCGATGCGGTATAGCACTACAAAGGAAACCTCTGATACTGGGCGAATTGGGTGGTTATCTCAGGATATTAATGTTGTGCCTAATAAAAAATATATTGCCTCCGTATGGTTAGCTTGTCATCGTGGGCAAGCTAAATTAGTCATTGAGAATATCGAAAAACCTGGTGGTGCTTATTTAGGTCGGATAGGCAACAGCGAGGTAATTACTGGCTATAGTGCTCATCAAGGCGAATTTAAAAATATGAAACGGGTTAAGGTTGTATTTACTGCACCTACTTCAGGCTGTATTCGTTTCGCATTACGATTAGATAATATTCAAGGTAAAGCTAATCCATTTTTATTTGCTCGTAGACCAATGCTTGAGGAGGCTAGTGATAATGTTACAGATATCACTCAGCCTAGCCCTTGGCAAAATGCCGGTGTAACCGCTATCCACGGTGGCTCAATAGTTACTAATACCGTTACTGCTCAACAAATTGCAGCAAATACCATTACCGCCAACGAAATCGCAGCCGGCACGATTGCAGCTCGAAATATGGCAGCAAACTCGATTAATGCAAGTCATATTGTAGGGAGTTCGATCACTGCGGATAAGCTAAATGTAAACAATTTAGCGGCAATATCAGCGAATCTCGGAGCTATTACAGCTGGTTCTATTAATATCAATAATAGATTCAAGGTAAGTAATGCTGGAGTAGTCGAAATGCGAGCCAATAGTGGAAATGTTGGTATGGTAATGAATAACAATAGTATTATTGTTTATGATGAACAAGGTAGGGTTAGAGTAAAAATGGGGAAATTATGA

Genome Context

Tertiary structure

PDB ID

de55543a7e9becdb18413752372f8bc3850e527d7d58291777a9a4f7af323cc1

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6742

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence