Protein

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Genbank accession
AUR99269.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MGWNYGKPSDGGGGGAGFELGPAQNVFTGADRTAAELERDTYTTANPSWLAEYEVATGVKPNIRLEFLDGTEQAVAYQVRNSAGTAWADNESFLAIKGNTGDSDISNVEDGQIPVKDGETLVSSGMQKLPDGQILAPKNFGVESASIDFGDVITVSEQSSFLGIRDNSNGQSYIVVDFERNRDEPSRSPRIFTSTEAEVTEVVQSDDSTELTGTSLTFDYTTTLTAYTNAITLRAQSEMTNVRIKITPSGGAVGLKYIPQKSSWISETEGLTLTAGDNEIDLFDSSLALESGTTLTVEIRADAISLLGTATGIPYLAVKKQDANFKSLVVKGAPVGVLGGETLEVQPNSSISAAFSDPATTETITLNLDDGNHSGDAIEFVFANNLGTNTVVFNASSDIGFFNTNSNTFVFSPQLTLTGRSARVIFEWYGNDWRIVR
Physico‐chemical
properties
protein length:437 AA
molecular weight: 46661,70570 Da
isoelectric point:4,28580
aromaticity:0,08467
hydropathy:-0,23776

Domains

Domains [InterPro]
DC_1057
STR
11–437
DC_1057
AUR99269.1
1 437
Architecture
STR
STR 11-437
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99269.1
1 437
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,9688
Central domain 175 373 200 0,1979
C-terminal 374 437 63 0,7158
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-373
C-terminal
374-437

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.263.B._10N.286.51.B1
[NCBI] 		1881273 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99269.1 [NCBI]
Genbank nucleotide accession
MG592628 [NCBI]
CDS location
range 18866 -> 20179
strand +
CDS
ATGGGTTGGAATTATGGAAAGCCTAGTGATGGCGGCGGTGGTGGTGCAGGGTTTGAACTTGGTCCCGCGCAGAATGTTTTCACCGGTGCGGATAGAACAGCCGCTGAACTAGAGCGAGACACTTACACGACCGCGAATCCCTCATGGCTTGCTGAGTATGAAGTTGCGACAGGCGTTAAGCCTAACATCCGTCTAGAGTTCTTAGATGGTACGGAGCAGGCTGTAGCATATCAGGTTAGAAATAGCGCTGGCACTGCATGGGCTGACAATGAAAGCTTTCTAGCAATTAAGGGCAACACTGGCGACTCTGATATTAGCAATGTTGAAGATGGCCAGATACCAGTAAAAGACGGCGAGACCCTTGTTTCTTCTGGTATGCAGAAGTTACCTGACGGGCAGATTCTAGCGCCTAAGAATTTTGGTGTTGAGTCTGCATCAATTGACTTTGGTGACGTAATCACGGTGTCTGAGCAAAGCTCTTTCTTGGGAATTAGAGATAACTCAAACGGTCAAAGCTACATAGTTGTGGACTTTGAGAGAAACCGTGATGAGCCATCTCGAAGTCCTCGTATATTTACATCTACGGAGGCTGAAGTTACGGAAGTGGTGCAGTCTGACGACTCAACAGAGTTAACTGGTACGTCGCTAACATTCGACTACACAACCACCCTTACAGCCTATACAAACGCAATTACACTTCGAGCTCAGTCAGAGATGACCAACGTTCGAATTAAAATTACACCTTCAGGCGGTGCGGTAGGCTTAAAGTACATCCCACAAAAGTCATCATGGATATCAGAAACTGAAGGCTTAACGCTAACCGCTGGCGATAATGAGATCGACTTGTTTGACTCATCACTTGCTTTAGAGTCTGGAACCACGCTAACTGTAGAAATTCGAGCTGATGCAATCTCGCTGCTTGGTACGGCGACGGGCATCCCATACCTAGCTGTTAAGAAGCAAGATGCCAACTTTAAATCACTTGTTGTCAAGGGCGCTCCAGTCGGCGTATTGGGTGGCGAAACTCTGGAAGTTCAACCAAACTCTAGCATTAGTGCGGCATTTTCCGACCCTGCGACAACAGAAACAATTACGTTAAACTTAGACGATGGAAACCACTCTGGGGATGCAATTGAATTTGTATTCGCTAACAATCTAGGCACAAACACAGTTGTGTTCAACGCGAGTTCAGATATTGGATTCTTTAACACGAACAGCAACACGTTTGTATTTTCACCTCAACTAACGCTTACGGGGCGTTCTGCTAGGGTTATTTTTGAATGGTATGGCAATGATTGGAGGATTGTACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
72524a337c52720aa6bd65625832961f712158ece49ba20fe7489951c9098d34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank