Protein

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Genbank accession
XUK81534.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPNLTKYSLDHEVRSSFEMGQLIPFLCQEVVPGDKYRVQSSTLVRLQPMLSPLMHRLDYFQRYYYVPYRLLIPNYEQLLTDPDSGNTVPGMDKYLQYSAKTFKDLFLEKPLLEYFGLATANGDVNPDKVIRDLNATPLLAYYLIYNHYYMRSDLDKRYIDQLRPEHFSSAELRQYIGNVMYVNEGLDYYTSAKTSTQYGNMVQLDMDGNNTITVPEMRLAERLQSFRERLMRVGGKYVNYIKEFFGVEPLDARVQIPKYLGGDSYVLNVSDVDQTAPSELGAVGESYGKSVSVNRTGQIEYDVYEHGLIIGLHFVRPRPSNIGGCPKLFTRRTYFDFFNPHFSALGYQEIEERELDVTRSKDGAFGYVPRYDEYRYGNDIVSGDFRRSLNYWHMSRDISKEQLSVDFVTCHPDNRVFSFENPDVVLYRVALRGAFIGLNSNVILDGYVWAPKGSLSIGSDVGFVMYKKSGSDPKFVFGGRLATMVEVSSGVFVKDSTVGIGDDESLVFRRLDDGETASNSFILDRHSTLFIYDSGNTDVGHLGDFSVLLSSNGSHPFLIDFSSTVSLSGDASGVLSLFKNGVSDFAKYLSFSHMSYKVAPYDVYKPVDNHVLSVTYNSVDVLRPLARYDGNVLR
Physico‐chemical
properties
protein length:634 AA
molecular weight: 72043,34130 Da
isoelectric point:5,53415
aromaticity:0,13091
hydropathy:-0,29227

Domains

Domains [InterPro]
IPR037002
ATT
3–433
IPR037002
IPR016184
Unmapped
6–376
IPR016184
IPR003514
STR
201–411
IPR003514
XUK81534.1
1 634
Architecture
ATT
ATT 3-433 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUK81534.1
1 634
Domain Start End Length (AA) Confidence
N-terminal 1 455 455 0,7733
Central domain 456 623 169 0,2001
C-terminal 624 634 10 0,8237
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-455
Central
456-623
C-terminal
624-634

Taxonomy

  Name Taxonomy ID Lineage
Phage Microviridae sp.
[NCBI] 		2202644 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUK81534.1 [NCBI]
Genbank nucleotide accession
PV067918 [NCBI]
CDS location
range 1 -> 1905
strand +
CDS
ATGCCAAATCTAACTAAATATTCACTTGACCACGAAGTTCGGTCGAGTTTTGAGATGGGGCAACTCATCCCGTTTTTGTGCCAGGAAGTAGTTCCAGGCGATAAATATCGTGTTCAGTCTAGCACACTCGTGCGTCTTCAGCCTATGTTATCCCCGCTGATGCATAGACTTGATTACTTCCAGAGGTATTATTATGTGCCTTATCGTCTGTTGATACCTAACTATGAGCAGTTGCTTACTGATCCTGATAGCGGTAACACTGTGCCAGGTATGGATAAGTATCTTCAATACTCTGCTAAGACCTTTAAGGATTTGTTCCTTGAAAAACCTTTGCTGGAGTATTTTGGTCTCGCTACTGCTAATGGTGATGTTAATCCTGATAAGGTTATAAGGGATCTTAATGCGACTCCCCTACTTGCTTATTATCTGATTTACAATCATTATTATATGAGGTCAGACCTCGATAAGCGATATATTGATCAGTTGCGCCCTGAACACTTTAGTAGTGCCGAGTTGCGTCAGTATATTGGTAATGTTATGTATGTCAATGAAGGACTTGATTACTATACTTCGGCTAAGACCTCTACACAGTACGGCAATATGGTACAGCTGGATATGGACGGTAATAATACCATTACTGTACCAGAGATGCGTTTGGCTGAGCGTTTGCAGTCTTTCCGCGAGCGCCTTATGCGTGTTGGTGGTAAGTATGTGAACTATATTAAGGAGTTCTTCGGAGTCGAGCCGCTCGATGCCCGTGTTCAGATACCTAAGTATCTAGGCGGTGATTCGTATGTACTTAATGTGTCTGATGTTGACCAGACAGCGCCCTCTGAGCTTGGTGCCGTTGGTGAGTCTTATGGTAAGTCTGTTTCTGTTAATCGTACTGGCCAAATAGAGTACGATGTTTACGAACATGGTTTGATTATTGGTCTTCATTTTGTGCGTCCCCGTCCGTCAAATATAGGTGGCTGTCCTAAGCTATTTACTAGACGTACGTATTTCGATTTTTTCAATCCTCACTTCTCCGCCTTGGGTTATCAAGAGATAGAAGAGCGTGAGCTTGATGTTACTCGTTCTAAAGATGGTGCTTTCGGGTATGTCCCGAGGTATGACGAATACAGATACGGCAATGATATTGTTTCCGGAGACTTTAGACGATCGCTAAATTATTGGCATATGTCTCGAGATATCAGTAAGGAGCAGTTATCAGTTGATTTTGTTACTTGTCATCCTGATAATCGTGTGTTTTCTTTTGAGAATCCTGATGTAGTTCTTTATAGGGTTGCTTTGAGAGGTGCTTTTATTGGTTTGAATTCGAATGTTATTTTGGATGGTTATGTTTGGGCGCCTAAAGGTTCCTTGAGTATAGGTTCTGATGTTGGATTCGTTATGTATAAGAAATCTGGCTCTGATCCTAAGTTTGTTTTTGGTGGTCGACTTGCTACTATGGTTGAGGTTTCTTCAGGAGTATTTGTTAAGGATTCTACTGTTGGTATAGGTGATGATGAATCTCTTGTTTTTCGTCGTTTGGACGATGGTGAGACAGCTTCTAATAGTTTCATATTGGATCGTCATTCAACCTTATTTATTTATGATTCAGGTAATACAGATGTAGGTCATTTGGGTGATTTTTCTGTTTTACTTTCTTCAAATGGTTCACATCCGTTTTTGATTGATTTTTCAAGTACTGTTTCTTTGTCTGGTGATGCTTCCGGTGTTTTATCTTTGTTTAAGAATGGTGTTTCAGACTTTGCTAAGTATTTATCTTTCAGTCATATGTCTTATAAGGTCGCTCCTTATGATGTGTATAAGCCAGTAGATAATCACGTATTGTCAGTGACTTATAATAGTGTTGATGTTCTTCGTCCGCTGGCTCGTTATGACGGTAATGTTTTAAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c3a4ec99b057fe5abe7fa9e88fe2f78846abd61ec8781cb2762846f984fab62f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4018
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50