Protein

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Genbank accession
XDJ04425.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPLIHLINRDEYERYYAVFTGSTIRVFDLAGNEKQVRFPTGAAYVQTANPRNDLRMVTVADYTFVVNRNVTVTESTEISTGGNFRDKGDALVNVRGGQYGRTLKVLINGTVYASYTIPNGSAPEHVNNTDAQWLANELANQLRNNLGPHGWTFNVGQGFIHVIAPANGEVAYISTEDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDSSKSADQYYVQYDSSRKVWKEVVGWNTKLHYTHDTMPHALIRASDGNFEFKTISWNPRVCGDADTNPYPSFVGSTINDVFFFRNRLGFLSGENIILSRTAKYFNFFPASVANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGANVQVLACQSINSDMFIILRNEFNTFLARVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTYETSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNNDPWLRLSGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 88946,38550 Da
isoelectric point:5,97278
aromaticity:0,12060
hydropathy:-0,32638

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
XDJ04425.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ04425.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9875
Central domain 139 350 213 0,4399
C-terminal 351 796 445 0,2153
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-350
C-terminal
351-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_CQ615
[NCBI] 		3234150 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ04425.1 [NCBI]
Genbank nucleotide accession
PQ010280 [NCBI]
CDS location
range 23851 -> 26241
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGTTATCCCGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACACTAGGAGGAAGTGGTGACTTAGGACAAGCACCTCTCATTCACCTGATAAACCGTGACGAGTACGAGCGGTACTACGCAGTGTTTACAGGAAGTACCATCCGAGTTTTCGATTTAGCTGGTAACGAGAAACAAGTGCGTTTCCCTACAGGGGCAGCATATGTACAGACAGCTAACCCAAGGAATGACCTTCGGATGGTAACAGTTGCCGACTACACGTTTGTCGTTAACAGGAACGTCACTGTAACCGAGTCCACAGAAATTTCAACTGGTGGTAACTTTCGGGATAAAGGTGACGCGCTTGTTAACGTGCGAGGTGGTCAGTACGGACGAACGTTGAAGGTTCTTATTAATGGAACAGTATATGCATCGTACACAATCCCCAACGGGTCCGCTCCAGAACACGTCAATAATACCGATGCGCAATGGCTGGCTAACGAGTTGGCTAATCAGCTCAGGAACAACCTAGGACCCCACGGGTGGACATTCAATGTTGGTCAAGGGTTCATTCATGTAATAGCTCCTGCAAATGGTGAGGTAGCCTACATATCAACCGAGGATGGATACGCAGACCAGCTAATTAACCCTGTCACTCACTATGCTCAGTCGTTCTCTAAGTTGCCACCAAATGCTCCAGACGGCTACATGGTTAAGATTGTGGGAGATTCCTCAAAGTCCGCTGACCAGTATTACGTTCAGTATGATTCCAGTCGTAAGGTATGGAAGGAAGTTGTTGGGTGGAACACCAAGCTGCACTACACTCATGATACGATGCCTCACGCTCTCATTAGGGCCTCTGACGGTAACTTTGAGTTCAAGACCATCTCGTGGAACCCTAGGGTGTGCGGTGATGCTGATACTAACCCGTATCCTTCATTCGTAGGCTCTACGATTAATGATGTCTTCTTCTTCCGTAACCGTTTAGGATTCCTTAGCGGAGAGAACATCATATTGAGTCGTACTGCAAAATACTTCAACTTCTTCCCAGCGTCGGTTGCTAACCTAAGTGATGACGACCCTATAGACGTAGCTGTGAGTACCAACCGAATAGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACTGCTTCTGGGACTCTCACGTCGAAGTCGGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTTTGGGATTGGACGCAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGATACTATGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCACACGTTCCTAACTACATTCCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACTGAAAACTTCTGTTCTGTACTATCTCACGGGGACCCTAGCAAAATCTTCATGTACAAATTCCTTTACCTTAACGAAGAGCTAAGGCAACAGTCATGGTCTCACTGGGACTTTGGGGCAAACGTGCAGGTTTTGGCATGTCAGAGCATCAACTCAGATATGTTCATTATTCTACGTAACGAGTTCAATACGTTCCTTGCGAGAGTTTCCTTTACGAAGAACGCCATTGACTTACAGGGAGAACCCTATCGGGCCTTTATGGATATGAAGATTCGCTACACGATTCCAAGCGGAACGTACAACGATGACACCTACGAAACTTCCATTCACATACCAACCATTTATGGTGCGAACTTCGGGAGGGGCAAAATCACTGTATTGGAGCCTGATGGTAAGATAACCGTATTTGAGCAACCAACTGCTGGGTGGAACAATGACCCATGGTTGAGGCTTAGTGGTAACTTAGAGGGACGAACGGTATACATTGGGTTCAACATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGATGGGTCAACCTCAACGGAAGACATTGGTCGCTTGCAGTTACGCCGAGCGTGGGTTAACTATGAGGAGTCTGGTACGTTTGACATTTATGTTGAGAACCAATCATCCAACTGGAAGTATACTATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACAGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACCGTGTCTATCTTGTCTGATGAGACTACCCCGCTGAACATCATTGGTTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5aba9f0accbe2c140f3d1601ea33edd6b090588c588f998a602fc4163188e31e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3189
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50