Protein

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Genbank accession
QPZ53411.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSRARELADIIGGGFTESDVPNLSASKITSGTFADARIAASNVSQHAQSFDDNKLVNDISTLALRQASNENKSAYNTQSMFVDVFQDSSGIASTSNTSRNADEYVTSATESADSATTFSYTGSDQTYTPSGKSKIDVYMWGAAGGAGYNYSSGGGGGRVTHTTAGAGGYTSGTIAITGSPTFKMVVGQGGSATDVATNYTNIAYGGGGRGNVQGHYGVGGGGGGYSGIFLTSVAHSNAILIAGGGSGSPSASDGANHYSGNGGGTTGQDGGLNNSSGHLADGNGKGGTQSAGGAAGATNYTGPISTAGSALQGGDGDHMCGGGGGGYYGGGGGGHTGNHGSSGSGGGSSYIGGHASAVVSNGSTEGSTETAEAGTATPPQTSSSYYSSGIGQGNNGANGGNGKIVIVPYTLTANATGNFISNAITASASTNKMGAIITYEDNQGTNALNTDIIIQLSADNGSNFTTATLVAMPDFATGIKMCKVNDLSVTAGTQLKYKILFANQSGSKIARIRGVSLQY
Physico‐chemical
properties
protein length:519 AA
molecular weight: 50992,15760 Da
isoelectric point:5,50204
aromaticity:0,06936
hydropathy:-0,30424

Domains

Domains [InterPro]
IPR055163
STR
138–406
IPR055163
IPR055163
STR
138–415
IPR055163
DC_1859
RBD
396–519
DC_1859
QPZ53411.1
1 519
Architecture
STR
RBD
STR 138-415 | RBD 416-519
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC028P
[NCBI] 		2796519 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53411.1 [NCBI]
Genbank nucleotide accession
MW273921 [NCBI]
CDS location
range 12938 -> 14497
strand -
CDS
ATGTCAAGAGCAAGAGAACTTGCTGACATTATAGGTGGAGGCTTTACTGAAAGCGATGTACCTAATTTGTCGGCATCAAAAATAACATCAGGAACATTTGCCGATGCCAGGATAGCTGCATCTAATGTTTCGCAACATGCACAATCATTTGACGATAATAAACTTGTAAATGATATTTCGACACTTGCTTTAAGACAAGCATCTAACGAAAATAAATCAGCTTACAATACTCAATCTATGTTTGTAGATGTGTTTCAAGATAGTTCTGGTATTGCTTCAACATCAAATACTAGCAGAAACGCAGACGAATATGTAACTTCAGCGACTGAAAGTGCCGATAGTGCAACCACTTTTTCATATACTGGCTCAGACCAAACATATACTCCATCTGGAAAATCTAAAATAGATGTTTATATGTGGGGTGCTGCTGGTGGAGCTGGATATAATTATTCTAGTGGTGGTGGTGGAGGTAGAGTTACTCATACTACAGCTGGAGCTGGAGGTTATACTTCAGGAACGATAGCAATAACTGGCTCTCCAACTTTTAAAATGGTTGTTGGTCAAGGAGGATCAGCAACTGATGTTGCAACCAACTATACAAATATTGCATATGGTGGTGGTGGACGAGGAAATGTTCAAGGTCACTATGGAGTTGGTGGTGGTGGTGGTGGCTACTCTGGAATTTTTTTAACATCTGTTGCACACTCTAATGCAATTTTAATTGCTGGTGGAGGATCAGGATCTCCTTCTGCATCTGATGGAGCTAATCATTACTCTGGAAATGGTGGAGGAACAACTGGTCAAGACGGAGGATTAAATAATTCAAGTGGACACTTAGCAGATGGAAATGGAAAAGGTGGAACTCAATCAGCTGGAGGTGCTGCTGGTGCTACTAATTATACTGGACCTATAAGCACTGCTGGATCAGCTCTACAAGGTGGCGATGGCGACCATATGTGTGGAGGTGGTGGTGGAGGCTACTATGGTGGTGGTGGTGGAGGTCACACTGGAAATCATGGATCATCTGGATCTGGAGGTGGCTCTAGTTATATTGGTGGTCATGCCTCAGCAGTTGTTTCTAATGGAAGTACAGAAGGATCAACTGAAACTGCTGAAGCTGGAACAGCAACACCACCTCAAACATCAAGTTCATATTATTCATCTGGTATTGGTCAAGGTAACAATGGTGCTAATGGTGGAAATGGAAAAATAGTTATTGTGCCATACACTCTAACTGCTAATGCTACTGGTAATTTTATTTCTAATGCAATTACAGCTTCAGCATCTACAAATAAAATGGGAGCAATTATTACTTATGAAGATAATCAAGGTACTAACGCATTAAATACAGATATTATAATTCAACTTTCTGCTGATAATGGTTCAAACTTTACAACAGCTACACTTGTTGCAATGCCAGATTTTGCTACTGGAATTAAAATGTGTAAAGTTAATGATTTATCAGTAACTGCTGGAACACAATTAAAATATAAAATATTATTTGCTAATCAATCTGGTTCTAAAATTGCTAGAATAAGAGGTGTATCTTTACAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c3e20b2c646bb9181642e75092cba074c7f5526c39109610e122521022590e80
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank