Protein

View in Explore
Genbank accession
QIG66716.1 [GenBank]
Protein name
DUF4082 domain-containing protein
RBP type
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MAMTFIGAATGSTTVTIPAHQAGDLLVVFAFRDGNTTAPTLPTNVAWQNKTTFSTTSCSARLAYFIATGSGTTSGTWTSATSMIILVYRPTSGFSLSLGTQTTATGTTTSFNWPARTAQKTDGTSTMVRFAGHRNTDSDIETGPTGWTQRATRVNGTTDEVSAHDLAAITADVAIFSKTLTGSGTGVGWLSATVEVIETRIVPVADTDTEFPKVSDGTTLNPTTTGGQKSWTGVGIGTAASTRVVGAIVRFVDNLSAPMSVLAATIGGIAANITGPSATGSAYFISAVVPTGTTADIVCTTSAGTLQTTDLLGVFVFDNVGLTPVSFTGTASTSASISGSAPDNSQVAAIMLATSAGDFIDAVSGNMSRTMSNFDKNSRTAVIVTKRFANATTATASFTGTNSTAYMVIMQEALVTEEWLHSGLGLGDTYSGTENSDGGNGVVLATEFCALKAGYITHIRFWKVSTDTATSRPVGLFNHSGTLVASATTSGEPTGTAQWITVALDTPLAVSDAAPLTTQTYYAAVLYSPERYPATGSLLDSGHYSANSKLYTPAGSSESVANGGVGNGAFKYVGSPATLQYPDGNFNNTYYWVDVKWAASLGGTTTPKSISISVTTTVTEKSTVGKNLAITAATTVSVLKRVNKTLAITSSLTTAVKKAVGKMLSINAATSVTPTQTPATNNPAWNPSTSNNVDTFSSYQGVANARAVTGEKGGVGSGINTDEDLLSSTGKLYFEIDLTNIDTAGGWGDISYLVLQSIEGDGYIYLAYDNGPATSYIQDQINTVSRNLSAPLADGDNVGFAIDNTIKKAWFRINGGAWQDATDATGNDPATGAGGIDYSAVGFIRRMSFQTSRGNYDISLRTNSAVYAGPEGFTTIAGTMPWINHPAWDPTAGTNATYTTAYTIPDAYTAAIDPDAASSAITDLDLIPTTGKYFIEVRRHRTDAQNNEVRFGLQNSSGSVSAGLIYTTVEWDRTASKFRQDGSLTSDALVFPYAVTVGFALDNDNKKLWILTSSDGDNNPIWEDFGGADGDPTTNTGGITLSEPLTAIFADATNGPFEIIIKPYGSTNPLPSGFTYVDGTTGQTYPAWDVYQAGPTEAYEDYFGVEKARSHAGVTTFGASTFGTDFATAYGGYPDTGKYYFELDILDTGEVGSYSYVGMGAFGPGGYFEIDRLEDGTGYLYWGDVATDGERVVPAYENGDTVCFAVDQTAKKVWWRINNGDWRDHVDDTGVDPATGTGGAVFTYPPLGQIWGNSQSSTAPYFDVGLRTNSSAYDVPSGFLYLDGSSSSTSTPLGLTINAVTTVFIQKQVLKGLTINATTTGSVKKGVSKAVPITATTTVSPLKGVTKKLAVAAVTTVAALTPATLRRTLSIAASTTVATVKRTNKSMLVTATTSVTAVKAVAKSLLVTATTTASALATKAFLKVISITATTTVSSKRSVSKLVAITAAPTLAVQRGVSKFLTITPTITVNAAKGLSKAILITVTTTTSATALRAFLKTITINVSTSVTTSKRTLKNIALIATLSVSTVKAVSKSFLITAATSVTTVASRTFLKAILIAASATVSARKTASVTLIVISGTTVTAVKRVGLTALIPVTTTVAVTKSIGKKIAILATITASAIAQFVAAVSGPVVKVWDGTAYKVAKLKVWNGVAWIIRNISVD
Physico‐chemical
properties
protein length:1661 AA
molecular weight: 172745,42530 Da
isoelectric point:6,34132
aromaticity:0,08429
hydropathy:0,06508

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM16
[NCBI] 		2509755 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66716.1 [NCBI]
Genbank nucleotide accession
MN988459 [NCBI]
CDS location
range 37176 -> 42161
strand +
CDS
ATGGCAATGACATTCATCGGTGCTGCTACCGGTTCCACCACCGTAACGATACCAGCCCACCAAGCGGGAGACCTCTTGGTGGTCTTCGCGTTTCGTGACGGCAACACGACCGCGCCGACGCTGCCGACCAACGTCGCATGGCAGAACAAGACGACCTTCAGCACGACAAGTTGCTCGGCCCGTCTCGCCTACTTTATCGCCACCGGCTCGGGAACCACTTCCGGCACGTGGACCAGCGCCACGTCGATGATCATCCTCGTCTACCGCCCGACGTCAGGCTTCTCCCTGTCGCTTGGCACACAGACGACGGCTACCGGCACCACGACCAGTTTCAACTGGCCAGCCCGCACCGCGCAGAAGACCGATGGCACGTCCACGATGGTGCGTTTCGCCGGTCACCGCAACACGGACAGCGACATCGAGACTGGCCCGACCGGCTGGACCCAGCGTGCCACTCGCGTCAACGGTACGACCGACGAAGTCTCGGCACACGATCTCGCCGCGATCACTGCCGACGTCGCGATCTTCAGCAAGACCCTGACGGGCTCGGGTACAGGCGTAGGCTGGCTCTCTGCCACCGTCGAAGTCATAGAGACCCGCATCGTCCCGGTCGCGGACACCGATACCGAATTCCCGAAGGTCTCTGACGGCACCACCCTCAACCCGACCACGACAGGAGGGCAAAAGTCGTGGACTGGCGTGGGCATTGGGACCGCCGCGTCTACCCGTGTGGTCGGAGCAATCGTTCGATTTGTGGACAACCTTAGCGCCCCAATGTCGGTGCTGGCCGCCACCATCGGCGGCATCGCGGCGAACATCACCGGTCCTTCGGCTACAGGCAGCGCCTACTTCATCAGCGCCGTGGTTCCCACTGGCACGACAGCGGACATCGTTTGCACGACCAGCGCAGGCACCCTGCAGACAACCGACCTGCTCGGGGTGTTCGTCTTCGACAACGTCGGCCTGACGCCGGTCAGCTTCACCGGGACGGCCTCGACCAGCGCCAGCATTTCTGGCAGCGCCCCGGACAATAGCCAAGTTGCGGCGATCATGCTTGCCACCTCGGCAGGCGACTTCATCGACGCGGTCAGCGGCAACATGAGCCGCACCATGTCGAACTTCGACAAGAACAGCAGAACCGCTGTGATTGTCACCAAGAGGTTCGCGAACGCCACGACCGCCACCGCCAGCTTCACCGGCACGAACTCGACCGCCTACATGGTCATCATGCAGGAGGCCCTAGTCACTGAGGAGTGGCTACATTCTGGCTTAGGACTTGGTGACACGTATTCCGGTACGGAGAACAGTGACGGCGGAAATGGCGTCGTGCTCGCCACCGAGTTCTGCGCCCTGAAGGCGGGGTACATCACCCACATCCGCTTCTGGAAAGTTTCCACTGATACAGCCACCAGCCGACCAGTAGGCCTCTTCAACCATTCTGGAACGCTTGTTGCCTCGGCCACGACCAGCGGCGAACCGACTGGCACGGCTCAGTGGATCACCGTGGCGCTCGACACGCCTCTGGCCGTATCAGACGCCGCACCCCTGACGACGCAGACCTATTACGCTGCCGTGTTGTACAGCCCGGAGCGGTATCCGGCGACCGGAAGCCTTCTGGACAGCGGCCATTACTCGGCCAACAGCAAGCTGTACACGCCTGCTGGTTCTTCGGAAAGTGTAGCGAACGGCGGCGTCGGCAACGGTGCCTTTAAGTACGTCGGTTCCCCCGCCACCCTCCAGTACCCAGATGGTAACTTCAACAACACCTACTACTGGGTGGACGTGAAGTGGGCGGCTTCACTCGGCGGGACCACGACCCCGAAGAGCATCAGCATCAGCGTCACCACGACCGTTACAGAGAAGTCCACGGTCGGCAAGAACCTCGCCATCACCGCCGCAACCACCGTCTCCGTGCTGAAGCGGGTCAACAAAACGTTGGCGATCACCTCCAGCCTGACCACGGCCGTCAAGAAGGCGGTCGGCAAGATGCTGTCGATCAATGCGGCTACCAGCGTCACCCCGACGCAGACCCCCGCCACCAACAATCCGGCATGGAACCCCAGCACCTCGAACAACGTTGATACCTTCTCTTCCTACCAAGGCGTGGCCAACGCCCGGGCGGTCACCGGGGAGAAAGGCGGCGTCGGGTCAGGCATCAACACCGACGAAGACCTACTGTCCAGCACTGGCAAGCTGTACTTCGAAATCGACCTCACCAACATCGACACCGCAGGCGGCTGGGGCGACATCAGCTATCTCGTGCTGCAGTCGATCGAGGGCGACGGCTACATCTATCTGGCTTACGACAACGGCCCAGCCACCTCGTACATTCAGGATCAGATCAACACCGTTTCCCGCAACCTGTCCGCGCCGCTGGCGGACGGCGACAACGTCGGTTTCGCCATCGACAACACCATCAAGAAGGCTTGGTTCAGGATCAACGGCGGCGCTTGGCAGGACGCTACCGACGCGACCGGCAACGATCCAGCCACCGGAGCCGGGGGCATAGACTACAGCGCGGTCGGCTTCATCCGTCGCATGTCGTTCCAGACTTCGCGCGGCAACTACGATATCAGCCTACGGACCAACAGCGCCGTCTACGCGGGACCGGAGGGGTTCACCACCATTGCCGGGACAATGCCGTGGATCAACCATCCGGCATGGGACCCCACCGCTGGCACTAACGCCACTTACACGACTGCCTATACAATTCCTGATGCATATACTGCTGCAATCGACCCTGATGCTGCGTCCTCTGCGATTACCGATCTGGACCTCATTCCGACTACTGGTAAGTACTTTATCGAAGTTAGACGACATCGGACAGACGCTCAGAATAACGAAGTCCGTTTTGGTCTACAGAACAGTAGTGGATCAGTTTCAGCCGGTCTGATTTATACTACAGTAGAGTGGGACAGGACTGCCTCCAAATTCAGGCAAGATGGATCACTAACGAGTGATGCGTTGGTCTTCCCCTATGCTGTCACTGTTGGTTTTGCACTCGATAATGACAATAAGAAGCTCTGGATACTCACTTCCTCTGATGGTGATAACAATCCAATATGGGAAGACTTCGGCGGTGCTGATGGTGATCCTACGACTAATACTGGTGGTATCACTCTCAGTGAACCACTGACAGCCATCTTTGCTGACGCAACGAATGGACCTTTTGAGATTATCATCAAACCATATGGTAGTACTAACCCCCTGCCTTCGGGGTTTACCTATGTCGATGGTACGACAGGTCAAACATATCCAGCATGGGACGTGTATCAGGCTGGTCCAACCGAGGCTTATGAAGACTATTTCGGCGTAGAAAAGGCTCGTTCGCACGCTGGTGTCACTACTTTTGGGGCCTCTACCTTTGGTACTGACTTCGCTACAGCATACGGTGGCTACCCTGACACTGGGAAGTATTACTTTGAACTCGACATCCTCGATACAGGTGAGGTCGGTAGTTACAGTTACGTAGGTATGGGTGCCTTTGGTCCGGGTGGCTATTTCGAAATCGACCGTCTCGAAGATGGTACAGGGTATCTTTATTGGGGTGACGTCGCTACCGATGGTGAACGAGTAGTACCTGCATACGAAAATGGAGACACTGTCTGTTTTGCAGTAGACCAAACGGCTAAGAAAGTCTGGTGGCGTATCAACAATGGTGATTGGCGAGATCATGTAGATGATACCGGGGTCGATCCGGCTACAGGTACAGGCGGTGCTGTCTTTACCTATCCTCCTCTGGGGCAAATTTGGGGTAATAGTCAGAGTTCGACCGCCCCTTATTTTGACGTAGGTCTCAGGACTAACTCCTCGGCCTATGACGTCCCGTCTGGCTTCCTGTATCTGGACGGCTCAAGCTCCTCGACCAGCACCCCGCTCGGCCTGACGATCAATGCCGTGACCACGGTCTTCATCCAGAAGCAGGTGCTCAAGGGCCTCACCATCAACGCCACGACGACGGGAAGCGTTAAGAAGGGCGTCAGCAAGGCCGTGCCGATCACCGCCACCACCACGGTGTCCCCGCTGAAGGGCGTCACCAAGAAGCTGGCAGTCGCCGCCGTCACCACCGTCGCAGCCCTGACCCCGGCGACCCTGCGGCGCACCCTGTCGATCGCAGCCTCCACCACGGTTGCCACGGTCAAGCGGACCAATAAGTCTATGCTGGTTACGGCCACGACGTCTGTGACAGCCGTCAAGGCGGTTGCCAAGTCGCTGCTCGTCACTGCCACCACGACAGCGTCGGCGCTGGCCACCAAGGCGTTCCTGAAGGTCATCAGCATCACCGCGACGACCACCGTCAGCAGCAAGCGCTCGGTCTCGAAACTGGTGGCCATCACTGCGGCCCCCACGCTGGCCGTACAGCGTGGCGTCAGCAAATTCCTGACCATCACACCGACGATCACCGTCAACGCTGCCAAGGGCCTCTCCAAGGCGATCCTGATCACGGTAACGACGACGACTTCGGCCACGGCGCTCCGTGCCTTCCTGAAGACAATCACCATCAACGTCAGCACGTCGGTCACGACCAGCAAGCGGACGCTGAAGAACATCGCCCTGATCGCCACTCTTTCGGTCAGCACCGTCAAGGCCGTCAGCAAGAGCTTCCTGATCACGGCCGCGACTTCCGTTACCACGGTAGCCAGCCGCACCTTCCTGAAGGCTATCCTGATCGCCGCGTCGGCCACGGTCTCGGCACGCAAGACCGCGTCTGTCACACTGATCGTCATTTCTGGAACCACTGTGACAGCCGTCAAGCGCGTCGGCCTGACCGCACTGATCCCGGTGACCACGACCGTCGCCGTGACCAAGTCGATCGGCAAGAAGATCGCTATCCTCGCCACGATAACGGCCTCGGCTATCGCCCAGTTTGTCGCCGCCGTCAGCGGCCCCGTGGTCAAGGTCTGGGACGGCACTGCCTATAAGGTCGCCAAGCTGAAAGTCTGGAACGGCGTGGCGTGGATTATCCGCAACATCTCAGTGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2551d00c8fd762f9ee62515399ed460fee66e4943c53606f9fcc82a94eaf90e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank