Protein

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Genbank accession
XLE98874.1 [GenBank]
Protein name
tail spike protein depolymerase
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNIANQVKADSQSAGASATAASASESAAKTSETNAKASETAAKTSEANAKASESAAKTSETNAKASETAAKTSETNAKTSEVAAETARNQVQQIIDNAGEQSTLVVLAQPDGASKSYSKNAPVSLLLRRNIFEYMTEADRNTISATVGVEVVVDYALQAAIDDGVMGLYFPPVPGVYVFGQSLVTLPVGFSFEGKSRRTYTAYSDASFNNVGTVFRLFNGASAIFKLTSRHTFRSVVFDGRNKSVPLMRGDDQTQWCRFYDCGIHRWSVGIGNSSPNGYSATLIVSGGTISSNKVGVRNVIDSLFLGAAINANEENGVELMTGANNNAFIGVRNEWNNGDNYFGYGCKRILIQGELIDRAGKRAVAATGGAQFTLSGVAVQRSGRLATEGSVDDAHYYIEGDGSSIIETAVHTTTGANDDGSGRQSPTYILATGGKSSDEKSFIASASILSGYGGSSWLRSGFVKTLSVIGCTGVDDVKNFGFRRISNGEQYLGDATGLSLSGAGNTATLTFQTTSQDFPRYTSDLLVRTLEFRVRNNINTGAIAYYSVKLIIYREQASANIAVDTASIETFATLSSGTWGRASDSPTGVSLDFAISADGATLTVTLTAIDSASRIINARLRA
Physico‐chemical
properties
protein length:742 AA
molecular weight: 78312,02670 Da
isoelectric point:5,34221
aromaticity:0,08086
hydropathy:-0,11752

Domains

Domains [InterPro]
DC_0313
STR
1–171
DC_0313 DC_2078 DC_0770
DC_1802
ATT
228–272
DC_1802
XLE98874.1
1 742
Architecture
STR
STR
ATT
STR
STR 1-171 | STR 182-227 | ATT 228-272 | STR 400-627 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLE98874.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9640
Central domain 271 606 337 0,9813
C-terminal 607 742 135 0,9639
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-606
C-terminal
607-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Smiley
[NCBI] 		3374125 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLE98874.1 [NCBI]
Genbank nucleotide accession
PQ337355.1 [NCBI]
CDS location
range 20439 -> 22667
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACTAAATGGCAATCATCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGTGACTCGCTTACCGTTGACGGTCTGGCGCAAGATGTTGCGGAAACACTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAATATTGCCAACCAGGTAAAGGCGGATTCACAATCCGCAGGCGCGAGCGCTACGGCTGCGTCGGCGTCTGAAAGCGCTGCAAAAACTTCAGAGACGAACGCAAAAGCGTCAGAAACTGCTGCGAAAACCTCGGAGGCCAATGCGAAAGCGTCTGAAAGCGCTGCAAAAACTTCAGAGACGAACGCAAAAGCGTCAGAAACTGCTGCGAAAACCTCGGAGACTAATGCGAAGACGTCAGAGGTTGCAGCGGAGACTGCAAGAAACCAAGTGCAGCAGATCATTGATAATGCTGGCGAACAGTCAACGCTTGTTGTTCTTGCGCAGCCGGATGGGGCGAGTAAATCGTACTCGAAAAATGCTCCTGTTTCATTGCTTCTGCGGAGAAACATCTTTGAGTACATGACCGAGGCGGATCGTAACACAATTTCAGCAACTGTCGGGGTTGAGGTCGTTGTAGATTATGCCCTTCAAGCAGCAATCGACGATGGTGTTATGGGGTTATATTTCCCCCCTGTTCCAGGCGTTTATGTTTTTGGGCAAAGCCTGGTTACACTACCCGTAGGGTTTTCATTCGAAGGTAAATCAAGAAGAACGTACACAGCATATTCAGATGCATCATTCAATAACGTAGGTACTGTGTTCCGTTTATTTAATGGGGCGTCAGCTATTTTCAAGCTAACCTCCCGACACACATTCAGGAGCGTTGTTTTTGATGGGCGTAATAAATCTGTTCCTCTTATGCGAGGTGATGACCAAACACAGTGGTGTCGATTTTATGACTGCGGAATACATCGCTGGAGTGTTGGTATTGGCAACTCAAGCCCTAATGGCTACTCAGCAACGTTAATCGTCTCTGGCGGCACAATCTCAAGTAATAAGGTTGGTGTGAGAAACGTTATTGACTCCTTGTTTTTAGGGGCAGCAATAAATGCCAACGAAGAGAATGGTGTTGAACTGATGACGGGGGCGAATAATAACGCATTCATTGGTGTCAGAAACGAATGGAATAATGGCGATAACTATTTTGGATATGGGTGTAAGCGGATCCTGATTCAGGGTGAGTTGATAGACCGAGCTGGAAAACGCGCAGTAGCCGCTACGGGAGGAGCACAGTTTACTCTTTCTGGTGTAGCAGTGCAGCGCTCAGGAAGGTTGGCAACAGAGGGTAGCGTGGATGATGCTCACTATTATATCGAAGGCGATGGTTCTTCCATAATAGAAACAGCAGTTCATACCACTACCGGTGCAAACGATGATGGATCGGGAAGACAATCACCGACGTATATACTTGCAACTGGTGGTAAATCTTCTGATGAGAAAAGCTTCATCGCCTCAGCGTCTATCCTTTCAGGTTACGGAGGGTCATCATGGCTACGCTCTGGATTTGTTAAAACGTTATCAGTAATCGGTTGCACTGGTGTTGATGATGTTAAGAACTTTGGTTTTCGTCGCATAAGTAATGGTGAGCAATACCTTGGGGATGCAACAGGTCTGTCGTTATCTGGGGCAGGAAATACTGCAACGCTAACTTTCCAAACAACATCACAGGATTTTCCACGTTATACATCTGATCTTCTTGTCCGTACTCTGGAATTTAGAGTGCGTAATAATATAAATACAGGAGCTATTGCGTATTACTCTGTAAAATTAATTATCTATCGTGAGCAAGCGTCAGCCAATATAGCAGTGGATACGGCATCTATTGAAACTTTCGCTACTCTAAGTAGTGGGACGTGGGGGAGAGCCTCTGATTCTCCGACCGGGGTTTCTCTGGATTTTGCTATCTCTGCGGATGGTGCTACACTAACCGTTACACTTACGGCTATTGACTCTGCAAGTCGGATTATTAACGCAAGATTAAGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61b8602f97ea627a57c56ed0f50a7b0217a8a27787d9dfd7735bc082c2be5523
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7641
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Smiley Mora,D.A., Lessor,L. and Gill,J.J. 2021-01-28 — GenBank