Protein

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Genbank accession
QCW19705.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSVLPIGSGGVTPDQAEVLDKLSYNEPTDTLIADASVQTKPSTVYLGSAFGMSNAVQAVGFRLADGTDALCLVNRFDSDLGTISNPKFFALGKSSFLNVNLVDSVVMSSSIFVNYTTAGDNLTYSFDIKPATTGRLRAQYWLGADDSGAPVVDFFRDITQAEVDSGQPVLVEPNFYALTGGSQLFVRFSGVSLKGDGTLPWFRSKIMPYKEISIGGHVEVIGAAENDSEIYIGCKYVPDTTDGEVRRKVPFAFTSFFSVTDAKKNLSNSKKCIFDFTDFNQGTVVMKHSGDNLDFMHIDGDGWYLVDYVEANIVRV
Physico‐chemical
properties
protein length:316 AA
molecular weight: 34325,17200 Da
isoelectric point:4,61524
aromaticity:0,11392
hydropathy:-0,01867

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW19705.1
1 316
Domain Start End Length (AA) Confidence
N-terminal 1 225 225 0,0583
Central domain 226 305 81 0,1322
C-terminal 306 316 10 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-225
Central
226-305
C-terminal
306-316

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va_91-7-154_p41
[NCBI] 		2565523 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19705.1 [NCBI]
Genbank nucleotide accession
MK672803 [NCBI]
CDS location
range 644 -> 1594
strand -
CDS
ATGAGTGTATTACCTATTGGTAGTGGCGGAGTTACACCTGATCAGGCCGAAGTTCTAGACAAGCTGAGCTATAACGAGCCAACGGACACGCTGATCGCTGACGCGTCAGTACAAACCAAGCCAAGCACCGTTTATCTGGGCAGTGCCTTTGGAATGAGCAATGCAGTGCAGGCGGTTGGTTTTCGCCTTGCGGACGGAACCGACGCGCTTTGCTTGGTGAATCGTTTTGATAGCGATCTCGGGACGATTAGCAATCCAAAGTTTTTTGCTTTGGGTAAATCTTCATTTCTGAACGTGAACCTTGTTGACAGCGTTGTGATGTCAAGTTCTATTTTTGTTAACTACACGACCGCTGGCGATAACCTTACTTACTCATTTGACATTAAGCCAGCAACTACGGGAAGGTTGCGCGCTCAATACTGGTTGGGTGCTGATGATTCCGGCGCTCCGGTGGTGGACTTTTTTCGCGACATTACGCAAGCAGAAGTTGATTCTGGTCAGCCCGTTTTGGTTGAGCCTAATTTCTACGCGCTGACTGGGGGGAGCCAGTTATTTGTTCGCTTCTCCGGCGTTAGCCTTAAGGGCGACGGCACTCTGCCATGGTTTAGAAGCAAGATAATGCCATACAAGGAAATCTCAATCGGCGGTCATGTTGAGGTAATTGGTGCCGCTGAGAATGACAGCGAAATTTACATTGGCTGCAAGTATGTCCCAGACACAACTGACGGGGAAGTGAGACGAAAAGTCCCGTTTGCTTTCACTAGTTTTTTCAGCGTGACTGACGCAAAGAAAAATCTATCAAACTCTAAGAAGTGCATCTTTGACTTTACTGATTTTAATCAGGGCACTGTGGTGATGAAGCATTCTGGGGATAATCTAGACTTTATGCACATCGATGGTGACGGCTGGTATCTCGTTGACTATGTTGAAGCTAACATCGTGAGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d63c0e6dd35c003e82fec1482e72049b74dddf7e020186d19c341a20f50f3c3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large phenotypic and genetic diversity of prophages induced from the fish pathogen Vibrio anguillarum Andersen,N., Castillo,D., Kalatzis,P. and Middelboe,M. — — GenBank