Protein

View in Explore
Genbank accession
YP_009997179.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAGEITLPNVGLTAFWNLGDNSYKDGMDLNLTLMSVLAQAAILSQEAAVPGVPVAGGVYLATTDWSATVTTNSLQVYLNTTGFAPAATPPGVTVRNSGEWIEIVPQEGWTLYDRSANKLITFDGAAWVDTVPASTLPDFTGNAGKHLAVNGTEDGTEWVDASGSAISISQDTATNHAVTDADLAGNKLLKMNNAAANTVTVPSGLTGTEPLTIVQTGAGQTTIVAGGGVTVSSLGGLLAISGQYGSATLIPNGADSYLLIGALA
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26768,55920 Da
isoelectric point:4,05003
aromaticity:0,06061
hydropathy:0,20189

Domains

Domains [InterPro]
DC_1623
STR
2–264
DC_1623
IPR021251
STR
91–128
IPR021251
YP_009997179.1
1 264
Architecture
STR
STR 2-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage vB_RpoS-V16
[NCBI] 		2218618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ruegeria pomeroyi DSS-3
[NCBI] 		246200 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Ruegeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009997179.1 [NCBI]
Genbank nucleotide accession
NC_052969 [NCBI]
CDS location
range 22225 -> 23019
strand -
CDS
ATGGCTGGAGAAATCACCCTCCCGAACGTGGGCCTGACCGCTTTCTGGAACCTGGGGGACAACTCGTACAAAGACGGGATGGACCTGAACCTGACTCTCATGTCCGTCCTGGCGCAGGCGGCGATCTTGTCGCAAGAGGCGGCGGTCCCGGGCGTCCCGGTGGCGGGTGGGGTCTACCTCGCGACGACCGACTGGTCCGCCACGGTGACGACGAACAGCCTCCAGGTCTACCTGAACACGACCGGGTTCGCACCGGCAGCCACTCCCCCGGGCGTTACGGTTCGGAATAGCGGCGAGTGGATCGAGATCGTGCCGCAGGAGGGCTGGACGCTCTACGACCGCAGCGCGAACAAACTCATCACCTTCGACGGCGCGGCGTGGGTCGATACGGTTCCCGCTTCTACGCTGCCGGATTTCACCGGGAACGCCGGGAAACATCTCGCGGTCAACGGGACCGAGGACGGGACCGAGTGGGTGGATGCGAGCGGTAGCGCGATCAGCATCTCCCAGGACACCGCGACCAACCACGCCGTCACCGACGCTGACCTGGCCGGGAACAAGCTGCTCAAGATGAACAACGCGGCGGCGAACACCGTGACCGTGCCCTCTGGACTCACCGGGACCGAACCGCTGACCATCGTCCAGACCGGGGCCGGGCAAACCACGATCGTCGCGGGCGGCGGCGTGACGGTGAGCAGTCTCGGCGGCCTCCTGGCGATCTCGGGCCAGTATGGCTCGGCTACCCTGATCCCGAACGGCGCGGATTCCTACCTCCTGATCGGGGCGCTCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a23095837c054cc47923f14b7fbfeb141542c75bf62e97f507d9bb15bd373c1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse roseophage infecting Ruegeria pomeroyi DSS-3 Zhan,Y., Chen,F., Wommack,E. and Nasko,D. 2018-09-27 — GenBank