Protein

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Genbank accession
BBI47337.2 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGISVIQPSFGGGEISPALGARVDLQRYQISLKTCKNFTVMSQGGVRNRPGTRYVDQTINNEKVRLIRFKFSISDACVLVFSNLKMRVVRNGAYVLNSAGPNTGQPFELVTPYTLADLDQLNFTQSADVMTFVHTLYRPRELKRFANDNWTLTEATYLPSVSAPASATATPVAGTGNTQVWRYQVTAVYDDSNTLEESLPVTSNAITVNASVLQASLTWPVVSGATYYNIYKDNSGAGVYGFTGRSTTTTFTDVNIVPAKTDTPPSGLDPFVGAGNYPGAVGYYQQRKVYGGTLNRPQTSYFSRTGVFNNFGYATPSKDDDAITWTMASTEVNRILNYLPLRQLLTLTSGAEWIIAGATSGFTGKTINGNPQSYNGSGFVPPLVLNDTALYLQGRGQAVSSLNYSLEADGLASDDLTIWSAHLFRDYPIVEWTYQKLPDSIVWAVRGDGALLGLTYMKKQDVVAWHQHETDGFVESITCIPEGSDDIVYMVVRRVIQGVTRRYIERMQSRQIPLIRNSKKRDVAQSYFVDCGLSYQGWNLGATTYTLSGGVTWEYPEAMIVTSSSGTGFSGADVGRQIHLRDPQTQNILRLDVAAFLSAGSVSVVPTSIVPLGLRNVPVVNWALALKTFVGLSHIEGKGVAILADGNVVSENGPNSTPVNLVVSGGSVTLPNHAAVAHIGLPYVSDLETLRINIQGQETLNDKHKTVSSLTVVVEESRGIFASAGEGKEFYELKQREFENYNDPTELLSGAGRVNIPNDWDNQGQVAIRQLDPLPITILAIIPELTLAGRK
Physico‐chemical
properties
protein length:791 AA
molecular weight: 86113,97530 Da
isoelectric point:5,94686
aromaticity:0,09229
hydropathy:-0,13401

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BBI47337.2
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 532 532 0,9348
Central domain 533 731 200 0,2246
C-terminal 732 791 59 0,0247
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-532
Central
533-731
C-terminal
732-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HU1
[NCBI] 		2056127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas lactis
[NCBI] 		1615674 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI47337.2 [NCBI]
Genbank nucleotide accession
AP019415 [NCBI]
CDS location
range 11226 -> 13601
strand -
CDS
ATGGGTATCTCTGTCATTCAGCCAAGCTTCGGCGGTGGGGAGATCTCGCCAGCTCTGGGTGCGAGGGTTGACCTTCAGCGCTATCAGATCAGCCTGAAGACCTGCAAGAACTTCACCGTCATGTCGCAGGGTGGTGTACGCAACAGGCCAGGCACGCGCTACGTAGACCAGACCATCAACAACGAGAAGGTCCGCCTGATTCGCTTCAAGTTCAGCATCAGCGATGCATGCGTGCTGGTCTTCAGCAACCTCAAGATGCGTGTTGTGCGCAACGGAGCTTACGTGCTGAACAGCGCCGGCCCGAACACTGGGCAGCCATTTGAGCTTGTCACGCCGTACACGCTGGCAGACCTGGATCAACTGAACTTCACCCAGTCGGCGGACGTGATGACGTTCGTGCATACGCTGTACCGCCCGCGCGAGCTGAAGCGGTTTGCGAACGACAACTGGACGTTGACCGAGGCGACATATCTTCCGTCCGTATCTGCGCCTGCGTCAGCGACCGCTACGCCTGTAGCTGGCACGGGGAATACCCAGGTATGGCGATACCAGGTCACAGCTGTTTACGACGACTCAAACACCCTTGAGGAATCGCTGCCTGTTACCTCCAACGCGATCACCGTGAACGCTAGCGTCCTGCAAGCCAGCCTGACTTGGCCGGTGGTGTCTGGCGCTACGTACTACAACATCTACAAGGATAACTCTGGCGCTGGCGTGTACGGTTTTACCGGGCGCTCCACGACCACTACGTTCACAGACGTCAACATTGTCCCAGCCAAGACCGATACGCCGCCATCTGGCCTTGATCCTTTCGTTGGAGCAGGAAACTACCCTGGTGCCGTGGGTTATTACCAGCAGCGCAAGGTATATGGGGGAACCCTGAACCGTCCGCAGACCAGCTATTTCAGCAGAACCGGCGTTTTCAACAACTTTGGGTATGCCACTCCGAGCAAGGATGACGATGCAATCACCTGGACCATGGCCAGTACGGAGGTGAATCGAATCCTGAATTACCTCCCGCTGCGCCAGCTTCTGACGCTGACATCAGGCGCTGAATGGATCATCGCCGGGGCAACGTCGGGGTTCACCGGCAAGACCATCAACGGCAACCCGCAGAGCTACAACGGTTCAGGCTTTGTTCCGCCCCTTGTGCTTAACGACACGGCTCTCTATCTGCAAGGCCGTGGACAGGCCGTTTCCTCGCTTAACTACTCGCTTGAGGCTGATGGCTTGGCCAGCGATGATTTGACGATCTGGAGCGCCCATCTTTTCCGGGATTATCCAATTGTCGAGTGGACATATCAGAAGCTGCCAGACTCGATTGTCTGGGCCGTGCGCGGTGATGGTGCTTTGCTTGGTCTGACGTACATGAAAAAGCAGGATGTTGTGGCCTGGCACCAGCATGAAACTGATGGCTTTGTCGAGTCGATCACCTGCATCCCTGAAGGCTCTGACGATATTGTTTACATGGTTGTTCGCCGAGTCATTCAGGGCGTTACCCGGCGCTACATCGAGCGTATGCAGTCGCGCCAGATCCCGCTTATTAGGAACTCAAAAAAGCGCGACGTGGCCCAGTCATACTTTGTTGATTGCGGCTTGAGTTATCAGGGCTGGAACTTAGGTGCTACGACTTACACGCTGTCTGGTGGCGTGACGTGGGAATACCCGGAGGCGATGATTGTAACTAGTTCGTCAGGAACAGGTTTTAGTGGTGCTGACGTAGGCCGGCAAATCCACCTTCGCGACCCACAGACGCAGAATATCTTGCGCCTGGACGTGGCAGCATTCCTTTCCGCTGGAAGTGTCTCAGTGGTTCCAACAAGTATTGTTCCTTTAGGGCTGCGAAACGTGCCCGTCGTAAACTGGGCGCTGGCCCTGAAGACATTTGTCGGCCTTTCTCACATTGAGGGTAAAGGCGTGGCTATCCTTGCTGATGGGAACGTAGTCAGTGAGAACGGGCCAAACTCAACGCCGGTAAACTTGGTGGTATCTGGAGGCTCTGTAACACTCCCAAATCATGCGGCCGTTGCTCACATCGGCCTGCCCTATGTCAGCGATCTTGAAACTCTGCGTATCAATATACAGGGCCAGGAAACCCTGAACGACAAGCACAAGACAGTTTCGTCTTTGACTGTTGTTGTAGAAGAATCGCGCGGGATATTCGCGTCAGCCGGCGAAGGAAAGGAGTTCTATGAACTTAAGCAGCGAGAGTTTGAGAACTACAACGACCCTACTGAACTTTTGTCTGGAGCCGGTCGCGTGAATATCCCGAACGACTGGGATAATCAAGGCCAGGTCGCCATCCGCCAACTTGACCCGCTGCCCATCACCATTCTCGCTATCATTCCTGAACTGACATTGGCGGGGAGAAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa709af278e3aa0276fe06c35026e5e75ab6cc8ce2e33a7b25c751ffba40124b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9165
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of Pseudomonas lactis bacteriophage HU1 isolated from raw cow's milk Tanaka,C., Nakayama,T., Toba,T. and Kashiwagi,A. 2020 31576458 GenBank