Protein

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Genbank accession
YP_010079544.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIIDDVVKGFITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLNKDFKEKIDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKINIANVEGLEDKLQEVKKIQDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSAEDFEEFKQTLNDLYAPKNHNHDERYVLSSQAFTIQQADNLYQLKSASQPTVKIWTGTENEYNYIYQKDPNTLYLIKG
Physico‐chemical
properties
protein length:390 AA
molecular weight: 43797,78950 Da
isoelectric point:5,16726
aromaticity:0,06923
hydropathy:-0,64949

Domains

Domains [InterPro]
DC_0885
STR
1–365
DC_0885
IPR018913
ATT
4–141
IPR018913 G3DSA:1.20.5.320
G3DSA:2.60.40.3350
ATT
14–125
G3DSA:2.60.40.3350
YP_010079544.1
1 390
Architecture
ATT
STR
ATT 1-141 | STR 142-365 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage HSA84
[NCBI] 		2059858 Uroviricota > Caudoviricetes > Azeredovirinae > Dubowvirus HSA84 >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010079544.1 [NCBI]
Genbank nucleotide accession
NC_054974.1 [NCBI]
CDS location
range 22369 -> 23541
strand +
CDS
ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACACTGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCACATGGCTTAACACCTAGATTACATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAGCCCCTTATTATCGACGATGTTGTAAAAGGATTCATTACCTACAAGATACCTAAAAAGGTTATCAAACACGCTGGTTATGTTCGCTGTAAGCTGTTTTTAGAGAAAGAAGAAGAAAAAATACATGTCGCGAACTTTTCTTTCAATATCGTTGATAGTGGTATTGAATCTGCTGTAGCAAAAGAAATCGATGTTAAATTGGTAGATGATGCTATTACGAGAATCTTAAAAGATAACGCGACAGATTTATTGAACAAAGACTTTAAAGAGAAAATAGATAAAGATGTCATTTCTTACATCGAAAAGAATGAAAGTAGATTTAAAGGTGCGAAAGGTGATAAAGGCGAACCGGGACAACCTGGTGCAAAAGGTGAAGCAGGTAAAAAAGGAGAACAAGGCGCACCCGGTAAAAACGGTACTGTAGTATCAATCAATCCTGACACTAAAATGTGGCAAATTGACGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTATTGGATAAAATCAATATCGCAAATGTTGAAGGGTTAGAAGATAAATTGCAAGAAGTTAAAAAAATCCAAGATACAACTCTCAACGACTCTAAAACGTATACGGATTCAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAACACATTAAGAGAATTAGCAGAAGCAATACAAAACAACTCTATTTCAGAAAGTGTATTGCAACAGATTGGCTCAAAAGTTAGTGCAGAAGATTTTGAGGAATTCAAACAAACACTAAATGATTTATACGCTCCAAAAAATCATAATCATGACGAGCGGTATGTTTTGTCATCTCAAGCTTTTACTATACAACAAGCGGATAATTTATATCAACTAAAAAGCGCATCTCAACCGACGGTTAAAATTTGGACAGGAACAGAAAATGAATATAACTATATATATCAAAAAGACCCTAATACACTTTACTTAATTAAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
797addb21718a92a570a8563e6a78bf6a3b09d37fba162deb50f88fff69e98e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Staphylococcus aureus bacteriophage HSA84 Seo,H.S., Na,H. and Ryu,S. 2014-04-30 — GenBank