Protein

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UniProt accession
A0AAU8GVK2 [UniProt]
Protein name
Glycerophosphoryl diester phosphodiesterase
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTLRTQASLGKGLKEVEKDDFNLNNLFLATITKVNYKYQTVELRTKYTYAGRNIGSNGEFSAPFPKSFIGRTPEGALFGDNNIIVPGSIALVGFLEGDAGQPFIINVYGYPNDNKMLTPNPLESGDINNREIYKYGSMIHQIKPSLTYSYLDGEGTSIKSFNGKSFISITSQEDERPLATDFYTGTEYEDLYTSYYGDGSEVEPRNQIAPNMLLKHRGEYTHDGEEDNHITTLHLTEKGAVRVSVMNTETQERTTQEMDENGNYRVIYQGDELILDEAQVWIEYGINKDTKSFYIKNEKQEFEFTDEGVLINGTPLIDNLDESLQEAFEKLKRIQKDLEDINNLLEGAGKENLEELIRTAKDSIEASGQASRDVEKLRGDISTVSQRVEGNIKKLDDYMKTMDDFVKDTNDFITEYTGSLDNVKRDVTTISNNENKYRHTTFRDIKIHADLPFKFQGYNEAISQNNATYYFPQGIARDDDYFYIVTRAPETGKMSLIVVWNANTFEYVTKFYAGNSGGEGIHVEKEGDKRYAYIKTSSNKLGKFDVTTLNSSIDGNTLQPLVEFDINMFMNFFRTKEGWAIEANNQTKGIYLQRDTLVFYNHDFSKRLGYLWIPPSNSTLWSNDLLGSISNYSAKKQGMSMVNNTLIQTLGGNWLPTRDKELHTYHLQGVQEISPSGQIMNDYTYSPQELKTYLESKGKVVNMIEHEGAFTYNNRLYSVIVYAGRTTTQANTGGVLIVEYKPKEKDYTFNEIGIPFSAPTANYNPYKTNIDNKLVNEYTGEEIPDIKTLAKYMIDTFQDKIVFYTSKIVGFKDFNGNEYKTGIKIELENLNNATFQLREVGLNEESFYVISYTRSSDTFSLYPRNKDVAYSNEDLLNLSYKVEGYFVDSINSPEGVSSSGWVKTRYYGTNGRIEYSPIDSYDTYINIRNNNQWQGWKKITTVE
Physico‐chemical
properties
protein length:943 AA
molecular weight: 107665,38960 Da
isoelectric point:4,97054
aromaticity:0,11983
hydropathy:-0,64178

Domains

Domains [InterPro]
DC_0539
STR
275–942
DC_0539
Coil
Unmapped
317–351
Coil
A0AAU8GVK2
1 943
Architecture
STR
STR 275-942 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AAU8GVK2
1 943
Domain Start End Length (AA) Confidence
N-terminal 1 438 438 0,7808
Central domain 439 702 265 0,8240
C-terminal 703 943 240 0,3579
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-438
Central
439-702
C-terminal
703-943

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage MSShimriz1
[NCBI] 		3230127 No lineage information
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
6e8c2b710a5b0575bc622715edaf23a56e1b4c7feb664dabf2f24f767f543760
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50