Protein

View in Explore
Genbank accession
YP_011112795.1 [GenBank]
Protein name
putative minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGNTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSTIDFSLDKSVPILNVGIESGKFSEVSTSTPSGSIIQGEVISYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDMFYNIEPETDIPLTIRNEHISIDFPSARITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34468,25990 Da
isoelectric point:4,97798
aromaticity:0,13712
hydropathy:-0,31873

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
YP_011112795.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011112795.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9052
Central domain 12 210 200 0,0429
C-terminal 211 299 88 0,5137
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ende
[NCBI] 		2713296 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus ende
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011112795.1 [NCBI]
Genbank nucleotide accession
NC_092900 [NCBI]
CDS location
range 21174 -> 22073
strand +
CDS
ATGTACTACTCTCTAATGAGGGAGTCAAAAGTTATAGTTGAGTATGATGGCAGGGCTTATCATTTTGATGCTCTGTCAAATTACGATATCAATACGTCCTATGAGGAATTTAAAACTCTTCGTAGGACTATCCATCGTAGAACCAATTATGCTGACTCTATTATTAACGCACAAACTCCATCTTCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAAGCTAACTTCTTTGAATGGATGGGCTTTGATCGAGAGGGTAATACATTCTTACTACCACTTTATAGTACAAATATTGAGCCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAATTGCTATGTATCTACCATAGACTTTTCTCTAGATAAAAGTGTTCCTATTTTAAACGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTATCTACTTCTACCCCCTCTGGTTCTATTATTCAGGGTGAAGTCATATCATATAGTCCTCCTAGAGTATCTACCAATAGTAACGTTTTACCAGCTCTTTTATCTGCTTCTATGTCCTTCCAGCAACAATGTTCTTGGAGAGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAGATGAATGCTTCGGCAACAATTGCATTTTACTACACCAAGCGATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCGAAATGAACATATTTCGATAGATTTTCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATATATACAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
98a0b73e3bec363bf73831632250cbebfb7b1b3a10be582b662634f7f52f473e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8428
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank