Protein

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Genbank accession
YP_009799486.1 [GenBank]
Protein name
putative tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMSPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTITSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFNYNTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPGNKLLIVSMDPREGYQLGMEYRGAYSDLQKQVQVQDGVFTVPEVLRPVGWADSYKDDLILTYLSSDSMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTLTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVTLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:752 AA
molecular weight: 82369,25380 Da
isoelectric point:4,98980
aromaticity:0,08910
hydropathy:-0,24069

Domains

Domains [InterPro]
IPR058003
TTP
2–752
IPR058003
YP_009799486.1
1 752
Architecture
TTP
TTP 2-752
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009799486.1
1 752
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,9853
Central domain 112 310 200 0,1323
C-terminal 311 752 441 0,0967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-310
C-terminal
311-752

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage myPSH1235
[NCBI] 		2099390 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799486.1 [NCBI]
Genbank nucleotide accession
NC_047944 [NCBI]
CDS location
range 20971 -> 23229
strand +
CDS
ATGCTCAGCGACCCGGTTTCCGGTATCCGCCGCAGACCTCCTGGTGAGATTGTATGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGTCTCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCATTACCTCTGCGGGGGTAGACTACTCAGGGGACTACACCGCCCCAGCTGCTGGTAGCACCAGCGGCAACGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGAGACTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAATGTGAGCGTACGTGGCGCGTACCTGTTCTTCTACGGGTTGAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTAGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAACTACAATACCCGCACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCTAGAGAGCTCGCCGCGGATGACAACATCATTGCGCGCGATTGGGAGGGGCGCTTAGCTGGTAACGACGATAACAACAGTAATCCCGGATTCGTCGAGAATGGCTACATCACTGGTATTGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGCGGCAGCTCTGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCCACTGTGACGTCACTGCTGGATACGGACCGTATCAGTATTAGCTCTGCGTCTGCACAGGATTCTGTGTACCGTACCGCTGTACAGTTTAACAGGGACCTGGTCCTGTTTGCTAACAGTATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGCATTAGTATTACCAGCACCTATGATTGTGACAGCCGTGTGACTCCGGTAATGGCGGGGCAGACAGTAATATACCCGAACAAGCGCAACGACAGCTACGCCGGTATTCTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACTGTGCACCTGCCGCGGTATATCCCCGGTAGGGTGTTGCAGATGCAAAACTCCAGCGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGAAATAGCCTGCTGGTATACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATACTGAGCGTGCAGGCGCTGGAGGATGAGGTATTCCTGTACATGCAAGGGCCCAGTCCCGGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAGGGTTATCAGTTGGGTATGGAGTATCGCGGGGCGTACTCGGATTTGCAAAAGCAAGTTCAAGTGCAGGACGGGGTGTTCACTGTTCCAGAGGTACTGCGCCCAGTCGGGTGGGCTGACAGTTACAAGGATGACCTTATCTTAACTTATCTGTCCAGCGACTCTATGGGGCCTACCGAGGTTGGCATCAAGGAGATTGCAGGGGAGAACACCCTGCGGGTTGTGCGCGGCGTACCTGATGGTACCTACGTAATCGGGCGGCGTTACCGCAGTACGTTAACGCTAACTACGCCTATTCTTCGGGACCAGAATGACAAACTCGTGGGAAGTGGGCACGTGCGCCTGCTACGATTGGACGTGGCGGTACGTAACTCCGGGCACTTCGATGTACAGGTACTGGACACCCCGCGCGACGTCAACTGGGGTGGGGAACTAACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACTTGGCTACGATTACCGTGCCATGCCGTACTAACGCAGACACAACCGAGGTAACGCTGTTTACTGAGGGCTCTATGGAACTGAACGTGCTGGATATATCATACATCCTGCGCTATAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf3ccf0863be77c76aecfd49d7eb0aba8a659515c5c18dd1924b565569f4de1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Therapeutic Characterization of Lytic Bacteriophages against Klebsiella pneumoniae Ramesh,N., Prasanth,M., Tamhankar,A.J. and Lundborg,C.S. 2021-10-13 — GenBank