Protein

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Genbank accession
XDQ99020.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MSNLMAGFGPDFVETQILSETNSVTYRITAKATHPNAVPNQYEFTLNQKAVGTPPSVGINVWRINNAVVDPIKTFTLSNDNSATANKAFVEYMDAQPSGLYLIMTNGEYKTSQIVDDWFAKNRSVMWQGADFAQRFPNSAYVALYGASKSRILIESFYANDGVLKEDSRASIDLVYDNVGDVGRTGVPFRSVEDTEEYNSTNGSEYKVYPVASPVISKLADYGMAPGLAMMIAGDFYASKALLDAGSTTRVTVRWFTGTAQTSSSVIEVPANKPDEWLRFEQFYTIPSGCDGFNVAVSRYPKPATDSLSAIRNFVMVQVSAAEADQNFAAQFGVNGIRMNNMIDGGTPYIFELPNTKVYPGGDYSASEFREVDA
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40961,25580 Da
isoelectric point:4,68304
aromaticity:0,11765
hydropathy:-0,22594

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ99020.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 46 46 0,4100
Central domain 47 245 200 0,5611
C-terminal 246 374 128 0,4846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-46
Central
47-245
C-terminal
246-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB3
[NCBI] 		3129266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ99020.1 [NCBI]
Genbank nucleotide accession
PP444687.1 [NCBI]
CDS location
range 8856 -> 9980
strand -
CDS
ATGTCAAACTTAATGGCGGGGTTCGGCCCCGATTTTGTAGAAACGCAAATTCTATCGGAAACAAACAGCGTAACTTACAGAATAACCGCAAAGGCAACACATCCCAATGCGGTTCCTAATCAGTATGAGTTTACACTAAATCAAAAGGCGGTAGGGACACCGCCTAGTGTTGGGATCAACGTATGGAGAATTAACAATGCTGTAGTTGATCCAATTAAAACCTTCACATTATCGAATGATAATTCAGCAACTGCAAACAAAGCGTTTGTTGAATATATGGATGCTCAACCTTCTGGGCTGTATTTGATAATGACTAACGGTGAATACAAAACAAGCCAAATCGTTGATGATTGGTTTGCTAAAAACAGATCCGTTATGTGGCAAGGCGCTGATTTCGCTCAGAGATTCCCAAATTCTGCATATGTTGCATTGTATGGGGCTTCAAAATCTCGTATACTGATTGAATCGTTTTACGCGAACGATGGAGTTTTAAAAGAAGATTCACGCGCATCAATCGATCTTGTCTATGATAATGTTGGTGATGTTGGGCGAACTGGTGTACCTTTCCGATCTGTTGAAGATACGGAAGAATACAATTCAACCAATGGATCTGAATATAAAGTATATCCTGTTGCAAGCCCAGTGATCTCTAAACTGGCTGATTATGGTATGGCTCCTGGATTAGCTATGATGATTGCTGGTGATTTTTACGCCAGCAAAGCATTATTGGATGCTGGATCAACAACAAGGGTTACTGTTCGATGGTTTACGGGTACTGCTCAAACTTCATCATCGGTGATTGAAGTTCCTGCAAATAAACCTGATGAGTGGTTACGATTTGAACAATTCTATACGATCCCTAGTGGTTGTGATGGATTTAACGTTGCTGTATCTCGTTATCCTAAACCCGCTACGGATAGTTTATCTGCGATCCGTAACTTTGTGATGGTTCAGGTATCTGCTGCCGAAGCTGATCAAAACTTTGCTGCACAGTTTGGGGTTAACGGTATCAGAATGAACAACATGATCGATGGTGGAACACCGTATATATTTGAATTGCCGAATACTAAGGTTTATCCAGGTGGTGATTATTCTGCTTCCGAATTCCGTGAAGTTGATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab345ebf9604e48fbf9d5c2755680d0c64b5ed8a8f2c290cdc0a2ef5463f9810
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6262
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank