Protein

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Genbank accession
WDS61273.1 [GenBank]
Protein name
SPRY domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIFATSTGTFSPLSIKGIRFDAGSAAAYVLDQSLEFWSGNDSLTYSPSSDGNRKKFTVSCWVRRGQDNTEENILVAGANSTNSIRFDGNGKITVKACGGQGTTKNMFFDGTGWYHICVNVDTTIQDDDLNDDRLIVWVNGIRQPLSGTLPTYDAQGDFMSTTTHYIGKQQHNASNYLQGALSDFRIYDGYAYPASTFGSFDIKGTWSPKAPELPTPNDGTTWSSTGSDPNSKISSGALTALFDGSPGSGDINISQGNGDSAYVIALNNVAIECKQSFAFFGNTGASTPAMKITEDNGVVHTIDSRESAYDWVEVPFRGTITKVEIAYRGGSGSSTGFGGFKADGILLVDGQTDTSTVYNGTPATNMGTHLKFASGSIGTNEFGSNWTVNSITNSHVTKDAPVIDDSRTDTGQGGELIGGFPSLNGRNGSGSTLSRAGTRLTSGSAWASFLGDIGFSSGKWYYEVTADTAAQYVYAGIAPHNHHHRDYPSKNNSWAMVNDGTCYYDQTGSNAITVTTGTALPNSGTVGIAVDADEGKIWWSVNGTWIGDTGTSPNPATGTDPVFDNLPTKGDNPETLYPCMDAYDTSININFGAKPFVNAAPSGFKCLNYKNISKPSDEDYVDPRDHFDVLKWKADGAGNNGGSPNIGRTIGGLKFDPDFVWSKCIVGNGYHNNLWDTLRGYGKNNALITDYAVGGEGAATGGRIMSVSNGSLNWADGPQWYNESNYEYVALCFNAGDWYDDSAYTNRTQKWSDMVTASAGNWGRTANPRESAFDGDVTSSGYGDTGSTSLTFAPTTDLTFTDRIEIMNNQGQGTVTWNGNTVNATSIGIWRTVYRGSGTINATYPITITGSTGFPTIAAIRVDGKILCNPIRLPSTGKWSDMMSTNTGPGDAYYNSIHGPGGVENSAFDGRMSGLPNAAHPSSGYFEFAPTGGISFTTSVRAYWNAGQTATYSYNGGSNVNLATTTQWITIASGSGTLNSLRVDRGGDASFFTAIEVDGEILRDPGIVMPGMINNQLYDQRYNWSSSLTSSAGGNFATNYEAASAFDGTYDSSGGAATDGNGTMTYTHPIAETVTSLEVRAWGQVDVTLPGGSVINSGGPVGGSYKKYWRKIDVGSGFSFTGSNSINIAAAPSGYTYLDGIRINGKELVDTESPQQVPTRPQLLKANNKLGFSVTTYQGTSTAESSIEGLNHTKIWSGFTNTDDGPEVWFIRNRKESPNDFIVNTILDSEAYIQNQRVAADSPVKWFQLPPDNGINAQGSPWIECPNDGYIHLGYNDQNTNMNGHGYVIYSFKSVPGISKFGVYRAFNGSNDADGPYVQLGFKPKMVWIKCITHGGNWVIALPEKGSRQTGYPWGGNTIDQCWSMDLSNLDTNTGNVITFHSNGFYINNNTGNMNYSDTNVGRRYLYFAFAEIPDYYANNV
Physico‐chemical
properties
protein length:1422 AA
molecular weight: 152522,09740 Da
isoelectric point:4,85998
aromaticity:0,11392
hydropathy:-0,43263

Domains

Domains [InterPro]
IPR013320
STR
32–190
IPR013320 DC_1713 IPR055906
G3DSA:2.60.120.200
STR
33–195
G3DSA:2.60.120.200 IPR001870 DC_2192
IPR043136
STR
427–627
IPR043136
IPR013320
STR
433–609
IPR013320
IPR003877
STR
458–596
IPR003877
IPR003877
STR
460–550
IPR003877
WDS61273.1
1 1422
Architecture
STR
STR
STR
STR 32-195 | STR 348-744 | STR 1166-1415 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61273.1
1 1422
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,0985
Central domain 100 314 216 0,4615
C-terminal 315 1422 1107 0,6149
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-314
C-terminal
315-1422

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-BM3
[NCBI] 		753087 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61273.1 [NCBI]
Genbank nucleotide accession
OQ319121 [NCBI]
CDS location
range 124603 -> 128871
strand -
CDS
ATGCCAATTTTTGCAACAAGCACAGGGACGTTTTCTCCCCTGTCGATCAAGGGTATTAGATTTGATGCTGGTAGTGCAGCAGCATATGTTTTAGATCAATCATTGGAATTTTGGAGTGGTAACGATAGCCTAACGTATAGCCCTTCATCTGACGGTAATCGAAAGAAATTTACAGTTAGTTGTTGGGTTAGAAGAGGTCAAGATAATACTGAAGAAAATATTCTCGTAGCAGGTGCTAATTCTACTAATTCTATCAGATTTGATGGAAATGGAAAAATTACTGTGAAGGCATGTGGTGGGCAGGGAACGACCAAAAATATGTTTTTTGATGGGACTGGGTGGTATCATATCTGTGTAAATGTTGATACTACTATTCAAGATGATGATCTCAATGATGATAGACTGATTGTTTGGGTAAATGGGATCAGGCAACCACTGTCTGGAACTTTACCAACATATGATGCACAAGGAGACTTTATGAGTACAACAACTCATTATATTGGAAAACAGCAACATAACGCTTCCAACTACCTTCAGGGAGCACTGTCAGATTTCAGGATTTATGATGGATATGCTTATCCTGCATCTACTTTTGGTTCCTTTGATATAAAAGGAACATGGTCTCCAAAAGCACCTGAACTTCCAACTCCCAATGATGGCACAACTTGGAGTTCGACTGGATCAGATCCCAACAGCAAAATCAGTAGTGGAGCACTGACTGCATTGTTTGATGGATCTCCAGGATCTGGAGACATTAACATTAGTCAAGGAAATGGTGATTCTGCATATGTTATTGCTTTGAATAATGTGGCAATTGAATGTAAGCAGTCATTTGCATTCTTTGGAAATACAGGTGCATCGACACCTGCGATGAAAATTACTGAAGATAATGGAGTTGTTCATACTATTGATAGTAGAGAAAGTGCATATGATTGGGTTGAAGTTCCCTTCCGAGGAACTATTACAAAAGTAGAAATTGCATATCGTGGTGGTAGTGGATCATCAACAGGATTTGGTGGATTCAAAGCCGATGGTATCTTATTAGTAGATGGTCAAACTGATACATCAACAGTTTATAATGGGACTCCTGCCACCAACATGGGCACACATTTGAAATTTGCATCAGGTTCTATTGGAACTAATGAGTTTGGATCAAATTGGACTGTCAACAGTATTACAAACTCTCATGTTACCAAGGATGCTCCAGTAATTGACGATTCAAGAACTGATACTGGTCAAGGTGGTGAGTTGATTGGTGGATTTCCAAGTCTCAACGGTAGAAATGGGTCTGGAAGTACTTTATCTCGCGCTGGAACTAGACTGACATCTGGTTCAGCATGGGCTTCTTTCTTAGGTGATATTGGATTTTCTAGTGGAAAATGGTATTATGAAGTTACTGCGGATACCGCTGCACAATATGTTTATGCAGGCATAGCTCCACATAATCATCATCATAGAGATTATCCAAGCAAAAATAATTCGTGGGCAATGGTGAATGATGGTACTTGTTATTATGACCAAACAGGTAGTAATGCAATTACAGTTACTACAGGAACTGCGTTACCAAATAGTGGTACAGTCGGAATAGCTGTTGATGCAGATGAGGGAAAAATTTGGTGGAGTGTAAACGGTACATGGATTGGAGACACTGGAACTTCACCAAATCCAGCAACTGGAACAGATCCTGTCTTTGACAATTTGCCAACTAAAGGTGATAATCCAGAGACACTATATCCATGTATGGATGCTTATGACACTAGCATCAATATAAACTTTGGAGCTAAACCATTTGTCAATGCAGCACCTAGCGGATTCAAGTGCTTGAACTACAAAAATATTTCTAAACCCAGTGACGAAGATTATGTTGATCCTAGAGATCACTTCGATGTTTTGAAGTGGAAAGCGGATGGTGCTGGGAATAATGGAGGATCTCCAAATATTGGTAGAACTATTGGGGGTTTGAAATTTGATCCAGATTTTGTATGGTCCAAGTGTATTGTAGGCAATGGATATCACAATAATTTGTGGGATACTCTTAGAGGATATGGTAAAAATAATGCTTTGATTACTGATTATGCTGTTGGTGGTGAAGGCGCTGCGACTGGTGGCAGAATTATGTCAGTATCAAATGGATCATTAAATTGGGCAGATGGACCACAATGGTATAATGAGTCTAACTATGAATACGTAGCACTCTGTTTCAATGCTGGAGATTGGTATGATGATTCTGCCTATACAAATCGTACCCAAAAATGGTCAGACATGGTTACAGCGAGTGCTGGTAATTGGGGAAGAACAGCTAATCCTAGAGAATCTGCTTTTGATGGTGATGTAACTAGTTCTGGTTATGGTGATACTGGTAGTACAAGTTTAACTTTTGCCCCAACTACAGATCTAACATTTACAGATAGAATTGAAATTATGAACAACCAAGGACAGGGAACTGTAACTTGGAATGGAAATACTGTAAATGCTACCAGTATTGGTATTTGGAGAACGGTTTACAGAGGTAGTGGAACGATCAACGCAACATATCCAATTACAATTACTGGTTCTACTGGGTTTCCAACAATTGCAGCGATTCGTGTTGATGGAAAAATTTTGTGCAATCCTATTAGGTTACCATCAACTGGTAAGTGGTCTGATATGATGTCCACAAATACTGGACCAGGGGATGCATATTACAATTCTATACATGGACCAGGCGGTGTTGAAAATAGTGCCTTTGATGGAAGGATGTCAGGTCTGCCTAATGCCGCACATCCAAGTTCTGGATACTTTGAATTTGCACCTACAGGAGGAATCTCATTTACTACAAGCGTTCGTGCGTATTGGAATGCAGGACAAACCGCAACTTATTCATACAATGGCGGTTCAAATGTAAATCTTGCAACAACTACACAATGGATAACAATTGCTAGTGGTAGCGGAACTCTCAATAGTCTAAGAGTTGATAGGGGTGGGGATGCTTCATTTTTTACTGCGATTGAAGTTGATGGAGAAATTCTTCGTGATCCAGGTATTGTTATGCCTGGTATGATCAATAACCAACTTTACGATCAAAGATATAATTGGAGTTCATCGTTGACTAGTTCAGCGGGAGGTAATTTTGCTACTAACTATGAAGCTGCATCTGCATTTGATGGTACTTATGATTCTAGTGGTGGTGCAGCAACAGATGGTAATGGGACCATGACTTATACCCACCCAATTGCAGAAACTGTCACTTCCCTTGAAGTTAGAGCATGGGGACAAGTGGATGTAACACTTCCAGGTGGTTCAGTGATTAATAGTGGTGGACCAGTGGGAGGATCTTACAAAAAATATTGGCGTAAGATTGACGTTGGTTCTGGGTTTAGTTTTACTGGAAGTAATTCAATTAATATTGCAGCTGCTCCATCAGGATATACTTATCTTGATGGAATCAGAATCAATGGTAAAGAATTAGTAGACACTGAGTCTCCACAACAAGTTCCTACTCGTCCTCAGTTACTGAAAGCAAATAATAAACTTGGTTTTAGTGTTACCACATATCAAGGAACTAGTACTGCTGAGTCTAGTATAGAAGGACTCAACCATACCAAAATTTGGTCAGGTTTTACTAATACGGACGATGGTCCAGAAGTTTGGTTTATCAGAAATAGAAAAGAATCTCCTAATGATTTTATTGTAAACACTATTCTTGATAGTGAGGCATATATACAGAATCAAAGAGTTGCCGCTGATTCTCCTGTGAAGTGGTTCCAACTACCTCCCGATAATGGAATCAATGCTCAAGGTTCTCCTTGGATAGAGTGTCCAAATGATGGTTATATTCATCTTGGATATAATGATCAAAACACAAATATGAATGGACATGGTTATGTGATATATTCATTCAAGTCTGTACCAGGAATTAGTAAATTTGGAGTCTATAGAGCATTTAATGGTTCAAATGATGCGGATGGACCATATGTTCAATTGGGGTTCAAACCAAAGATGGTTTGGATCAAGTGCATAACTCATGGTGGCAATTGGGTTATTGCTCTTCCCGAAAAGGGTTCAAGACAAACAGGATATCCTTGGGGAGGTAACACCATTGATCAGTGTTGGAGTATGGACTTGTCAAATCTGGATACTAATACTGGAAACGTAATCACTTTCCACTCTAATGGTTTCTATATTAATAATAATACTGGAAATATGAATTATTCTGACACGAATGTAGGTAGAAGATATTTGTATTTTGCGTTTGCGGAAATCCCAGATTATTACGCAAATAACGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b53e6e4ffddefdd7e5879c45b0e0736b6d5b6c822f692c2523afa3798f5ee024
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50