Protein

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Genbank accession
YP_009829564.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLEDGTTKMDSRTVHPMEIIVEVFCPSIDVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPEMISATPARLTFSQVLVQNPKPIMFRNAGDSSIIDRGLALAEDVVGSASDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:134 AA
molecular weight: 14830,87340 Da
isoelectric point:4,35184
aromaticity:0,05970
hydropathy:0,09478

Domains

Domains [InterPro]
DC_0601
STR
1–133
DC_0601
IPR054442
ATT
11–121
IPR054442
YP_009829564.1
1 134
Architecture
STR
ATT
STR
STR 1-10 | ATT 11-121 | STR 122-133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA01
[NCBI] 		2498591 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PA01 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009829564.1 [NCBI]
Genbank nucleotide accession
NC_048626.1 [NCBI]
CDS location
range 5793 -> 6197
strand -
CDS
ATGCTGGAAGACGGTACGACAAAGATGGACTCCAGAACGGTCCATCCTATGGAGATCATCGTTGAGGTATTCTGCCCTTCAATTGATGTCGTCGATCAGATTAATCAACTGCTCCTGGATCGCGATACGCTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGAATGATGTGTACCAGCGAAGCGCTCAATCAGACGCCAGAAATGATATCCGCAACTCCTGCGCGGCTGACATTTTCCCAAGTGCTCGTTCAGAATCCAAAACCTATCATGTTCAGGAATGCTGGAGACTCGTCCATAATCGACCGAGGGTTGGCCCTGGCCGAAGACGTTGTGGGCTCGGCCAGTGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c04d67de0b3a9592d00baa4796e74456d9224dbd5d7c7faecbf349743da85fcc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Pseudomonas aeruginosa PAO1 lytic phage PhiPA01 Ong,S.P., Miyanaga,K. and Tanji,Y. 2020-06 — GenBank