Protein

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Genbank accession
AOO08469.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MGKLNVGNLEGNFPNYRVTLHHDSELGIGSQLIIQNQQYMPLPSNTQNYHDNATYGARGAVRGAVRWNTTTEDIEVYNGSVWIPKTPPAAGIGTESNPARSGVEIFNAGLASGNYWIQPDNQVAYEMYVDNDRNGGGWTLCVVARTSTCQDHMNNSAVRITTTSGPRTSNTSTTKMADSWIQALRNSSTYTGSTAYWMEALGFNKNVFISSAATVNLLDSASNDNERTRISTTYQGTLDNRNPNTGTRGFGDHHTSGGTYFAYGRHPEEGNNCGFREDTNGASDGYLWVK
Physico‐chemical
properties
protein length:290 AA
molecular weight: 31707,15750 Da
isoelectric point:5,78527
aromaticity:0,09655
hydropathy:-0,67759

Domains

Domains [InterPro]
IPR036056
STR
94–140
IPR036056 DC_0434
IPR036056
STR
94–145
IPR036056
NF040941
Unmapped
108–140
NF040941
AOO08469.1
1 290
Architecture
STR
STR 94-290
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO08469.1
1 290
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,0156
Central domain 162 279 119 0,1172
C-terminal 280 290 10 0,9801
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-279
C-terminal
280-290

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO08469.1 [NCBI]
Genbank nucleotide accession
KX349277 [NCBI]
CDS location
range 27103 -> 27975
strand +
CDS
ATGGGAAAGTTAAACGTCGGTAACTTAGAGGGTAACTTTCCTAACTACCGAGTTACTCTTCACCATGACAGTGAGTTAGGTATTGGAAGTCAACTGATTATTCAGAATCAGCAGTACATGCCGTTGCCTTCTAATACTCAAAATTATCATGACAATGCAACTTACGGTGCTAGAGGTGCAGTAAGAGGTGCAGTAAGGTGGAATACTACCACCGAAGATATTGAAGTATATAATGGTAGTGTATGGATTCCTAAGACACCTCCTGCTGCAGGGATTGGCACTGAGAGTAATCCTGCTAGAAGTGGTGTAGAGATCTTTAATGCTGGTTTAGCATCTGGTAACTATTGGATTCAACCTGATAATCAGGTAGCATACGAAATGTATGTTGATAATGATAGAAATGGTGGTGGATGGACATTGTGTGTTGTTGCTAGAACATCAACATGTCAAGATCACATGAACAATAGTGCTGTTCGTATTACTACAACTTCTGGACCCAGAACTTCTAACACTTCTACTACCAAGATGGCAGACTCTTGGATTCAAGCACTGCGTAACTCCTCTACATATACTGGAAGCACCGCATATTGGATGGAAGCACTTGGATTTAACAAGAATGTCTTTATCTCTAGTGCTGCAACTGTCAACTTGCTTGATAGTGCATCAAATGATAATGAGAGAACTAGAATCTCGACTACCTATCAAGGTACTTTAGACAATAGAAATCCTAACACTGGAACCAGAGGTTTCGGTGACCACCATACATCAGGCGGCACATACTTCGCGTATGGTAGACACCCTGAAGAAGGTAATAACTGCGGATTTAGAGAAGATACAAACGGTGCTTCTGATGGTTACTTATGGGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcc5741f9969b8c396444198a0478824beebd67824c801ca8ed3c437c9e113ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50