Protein

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Genbank accession
YP_005098198.1 [GenBank]
Protein name
tail fiber assembly
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MADYLSINEFPGNGSIMQIEVSFAGNNPDVGSGAVPYFKPADVKAQFFTPATDTTPQIVEVKPLGYVGPNTFITLEPVPTGKILRVYRETEDRYSLVNFVALQNVTERDLDALARQTVFLVEEAKDAAQFAIDTAREAIRYATAATGVAREALALATTADRNASAAVVTANAASNVANQALVNANKAAQDAASAEQHATNVETLAAAAQTKADSAIVTANRADATANRAEGTANAIDGKATAAVATANAATATANRAESTANAIDGKATQAINTANSATTTANQAKATAEGIDAKASQALATANGAAADVAGANTKADQAIQTANQASANVAGKVNRSGDQMTGVLVVEPRVQAIAKADGKAMFEWHVAGQTAGMAWLTSDGILRFGQTGGNGSEVNQAMNIGFSSGNGSVRGEWRAASMVSVDGYHNNVYPQSGGDISLRANVSVFGNMTVTAAVNATTYTATQGSLYLRPAAAVANTHIWFQNQQGGELGLIYTDPWSTMHFRANGGGDTLALYANKTAGFNGNITAPSAAISGRVSAGELLSGGTVWSGNGASWLANDGNVYGGVWGGYLSNWVNSNLVTRAEFGGAVRANVAAFTAGQVGTYAMLQTRGMVNGGPDALVGGDQLGWATCAGDFSEIVGYGTWRVMGRVSTGNKVVSTTIWLRVS
Physico‐chemical
properties
protein length:668 AA
molecular weight: 68628,12220 Da
isoelectric point:5,26888
aromaticity:0,07036
hydropathy:-0,07979

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_005098198.1
1 668
Domain Start End Length (AA) Confidence
N-terminal 1 246 246 0,9710
Central domain 247 445 200 0,4406
C-terminal 446 668 222 0,8327
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-246
Central
247-445
C-terminal
446-668

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Bf7
[NCBI] 		1100790 Uroviricota > Caudoviricetes > Autographivirales > Bifseptvirus > Bifseptvirus Bf7
Host Pseudomonas tolaasii
[NCBI] 		29442 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_005098198.1 [NCBI]
Genbank nucleotide accession
NC_016764 [NCBI]
CDS location
range 34812 -> 36818
strand +
CDS
ATGGCAGACTACTTGTCTATCAACGAGTTCCCCGGCAATGGCTCCATCATGCAGATCGAGGTCAGCTTCGCTGGCAACAACCCCGATGTAGGCTCTGGTGCTGTTCCGTATTTCAAACCCGCTGACGTGAAGGCTCAGTTCTTCACTCCCGCGACTGACACCACTCCACAAATCGTGGAAGTCAAGCCGCTGGGTTACGTCGGCCCAAACACCTTCATCACCCTTGAGCCTGTGCCAACCGGCAAGATTCTTCGGGTGTACCGCGAGACGGAAGACCGTTACTCGCTGGTCAACTTCGTAGCGTTGCAGAACGTGACGGAGCGTGACCTTGACGCACTCGCCCGGCAGACCGTCTTCCTCGTTGAAGAAGCGAAGGACGCCGCGCAGTTCGCAATCGACACCGCCCGCGAGGCAATCCGATACGCCACTGCTGCTACCGGCGTGGCGCGTGAAGCTCTCGCACTGGCAACCACGGCTGACCGCAACGCTTCGGCGGCTGTGGTCACGGCCAACGCTGCTTCTAACGTCGCCAACCAAGCGTTGGTCAACGCCAACAAGGCAGCACAGGACGCCGCATCGGCTGAACAGCACGCCACCAACGTGGAGACGCTGGCCGCTGCTGCTCAGACCAAAGCTGACTCGGCTATCGTTACGGCGAACCGGGCAGACGCTACGGCCAACCGGGCCGAAGGCACCGCCAACGCAATTGATGGCAAGGCAACCGCTGCTGTGGCAACCGCAAACGCGGCTACCGCCACTGCCAACCGGGCTGAGTCCACTGCAAACGCGATTGACGGCAAAGCCACACAGGCCATCAACACCGCGAACTCCGCAACCACTACCGCGAACCAAGCCAAGGCAACCGCCGAGGGTATTGACGCGAAGGCATCGCAAGCATTGGCTACGGCCAACGGCGCCGCTGCTGACGTGGCAGGCGCAAACACCAAAGCTGATCAGGCAATCCAGACGGCAAACCAAGCAAGCGCAAACGTGGCTGGCAAGGTAAACCGCTCCGGTGATCAGATGACCGGGGTTCTGGTGGTCGAGCCGCGTGTGCAGGCTATTGCCAAGGCTGACGGCAAGGCGATGTTTGAATGGCACGTTGCTGGGCAGACTGCGGGTATGGCATGGCTGACCTCTGACGGGATACTCCGATTCGGGCAGACTGGTGGTAACGGCTCAGAAGTGAATCAGGCCATGAACATCGGATTCAGCAGCGGGAACGGTTCTGTGAGAGGCGAATGGCGGGCAGCTTCGATGGTATCCGTCGATGGCTACCACAACAACGTCTACCCGCAGTCCGGTGGTGACATCAGCCTTCGGGCTAACGTGTCCGTGTTCGGTAACATGACAGTCACCGCTGCTGTCAACGCCACCACCTACACTGCTACCCAAGGCAGCCTGTACCTACGGCCCGCTGCGGCAGTTGCAAACACGCACATCTGGTTCCAGAACCAGCAAGGCGGCGAGCTTGGTCTGATCTACACCGACCCGTGGTCTACCATGCACTTCCGCGCAAACGGTGGCGGCGACACCTTGGCGCTCTATGCAAACAAGACCGCAGGCTTCAACGGTAACATCACTGCCCCATCTGCCGCTATCTCCGGGCGAGTCTCTGCTGGTGAGTTGCTGTCGGGCGGAACTGTGTGGTCAGGCAACGGCGCTTCGTGGCTTGCGAACGACGGCAACGTGTACGGTGGGGTTTGGGGCGGCTACCTGTCCAACTGGGTGAACTCCAACCTCGTCACCCGTGCCGAGTTCGGCGGTGCTGTCCGGGCTAACGTCGCAGCATTCACCGCTGGGCAAGTCGGCACCTACGCCATGCTGCAAACTCGCGGTATGGTCAACGGCGGGCCGGATGCACTCGTCGGCGGTGATCAGCTCGGCTGGGCGACTTGTGCGGGCGACTTCTCGGAAATCGTCGGGTACGGCACTTGGCGTGTAATGGGCCGTGTGTCCACGGGTAACAAGGTTGTTTCTACCACTATTTGGCTGAGGGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57d54b0074dc46b0dad6bf73c529bacb7c460c68cb877652541e8592bd196333
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50