Protein

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Genbank accession
QXV72517.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGSLSVGIAISPAGLATLTSTEARSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGNEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNAGAFGNTANSGYVGTRKGLDWDNRSYYTNDGFETTDPWNRDGHTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 52884,07670 Da
isoelectric point:5,47015
aromaticity:0,06693
hydropathy:-0,19843

Domains

Domains [InterPro]
DC_0176
STR
1–423
DC_0176
SSF69349
STR
248–333
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
251–309
IPR015173 SSF88874
QXV72517.1
1 508
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage PSD9
[NCBI] 		2861000 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella dysenteriae
[NCBI] 		622 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV72517.1 [NCBI]
Genbank nucleotide accession
MZ561532.1 [NCBI]
CDS location
range 142338 -> 143864
strand +
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCCACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTTGCAACCACACAAGAAGTAATGGATGGTCTGGATGCTTATAGTGCAGTGACACCAGCAACTTTAAAAGCTCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTATGCTACTAACGCTGAAGCCATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCCGCATTAGCTGGTACCGATGATACCACAGCAATGACCCCGCTTAAAGTATCTCAGGCAATTGGTGCAGCGACGGCAGCGTTACCGGTTTATTCTACAGCAACGACTACAAATGAAGGTTTAGTTCGTTTAGCGACCAATGCCGAGGTTGGTAATGGAAGTCTTTCGGTAGGTATCGCTATTTCTCCAGCAGGATTAGCCACATTAACTTCCACCGAAGCCAGAAGTGGTATTATTAAACTCGCTGGTTGGGATATGGTATCTAATGGTACCGACCATACCGCCGCAGTTACACCTGCTTCTTTGTTAGCTCGTACAGGTAATACCGGACGTATTGGGTTGGTTCGTTTATCTACTACTGTAGGCCAAGGCGATGGTAATACGGCGTTGGCTTATAATGCTAACGTTATTTCTACTTCAGGCGGCGAAATATGGGGTACTTTAAACGTTAATGGAGCATTACGTCGTAATGGTGTTGATGTTGTTACCCATGACCAATTATCAGATAGCGTTCCGGTGGGTACTATTTGCATGTGGGGTGGCAATGAAGGTAATATACCTGGTAAATGGCGTGCTTGTGTAGGTGGGACTTACACTGGTGGTGCATATTTAAATGCTGTTGGTGGGCGTTGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTCGGTGGATATTCTGAAGGCGAAGTTAACCCGCATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAATGGTGTTGGTTCTTTCCCGCAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACATGATAATGCGGGTGCCTTCGGTAACACCGCTAACTCCGGATATGTTGGTACTCGTAAAGGCCTTGACTGGGATAACCGTAGTTATTATACCAACGACGGTTTTGAGACCACCGATCCTTGGAACCGTGATGGACATACCACATTGAATAGTGAAGGTCTTATTGCCAACGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea5b995e6fb156e684a37a9182102efc2188062464fa6f43384fef59070263c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50