Protein

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Genbank accession
YP_010302214.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MQFVSFSNRPVRPDSLQNGLFLFDSGTNVASIKSIDDWYKQAFNCFALTVAATNSYVQSGPVRSTTIPVVLHKIPTFGITSAVRDYWQRWTLFEDSYAYGKGYSVPTDARITGGQIKYFLVPPTGTGQLATGNFTTYKYEAGGSIAGLYTTTINVNTLSGMSSKTQYSGSEFGNYRSVSGKFYITTNNAWGIGAFSNFQFGSAAVTSVSKDSGPVENVTMSGVVSGGSSYCTWMGAVRTRRRKITGDATEYEMIVLKRGEDYDDSASTGAGGTKVINLSLQNMLNEKFFLDAPVVKL
Physico‐chemical
properties
protein length:297 AA
molecular weight: 32251,77700 Da
isoelectric point:9,03816
aromaticity:0,12795
hydropathy:-0,17508

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010302214.1
1 297
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,8760
Central domain 17 215 200 0,3904
C-terminal 216 297 81 0,9837
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-215
C-terminal
216-297

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_1
[NCBI] 		2869543 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302214.1 [NCBI]
Genbank nucleotide accession
NC_061448 [NCBI]
CDS location
range 57809 -> 58702
strand -
CDS
ATGCAATTCGTTAGCTTCTCTAACAGGCCGGTACGACCTGATTCTCTACAGAATGGTTTATTTCTGTTTGATAGTGGCACCAATGTTGCTTCTATTAAAAGCATTGATGATTGGTACAAGCAAGCCTTTAACTGTTTTGCACTGACTGTGGCAGCCACTAACAGTTATGTGCAGTCTGGTCCGGTACGTAGCACGACCATCCCAGTAGTTCTACATAAAATCCCTACGTTCGGTATTACTAGTGCTGTCAGAGATTATTGGCAACGTTGGACTTTGTTCGAAGATAGCTACGCGTATGGAAAGGGGTACTCAGTTCCTACTGATGCCAGAATCACGGGCGGTCAGATAAAGTATTTTCTTGTTCCTCCTACAGGAACCGGACAACTCGCAACTGGTAACTTCACAACGTACAAGTACGAAGCAGGAGGCTCGATTGCCGGTCTCTATACAACCACCATTAATGTGAACACACTTTCAGGTATGTCGTCAAAAACTCAATACAGCGGCAGCGAGTTCGGTAACTACAGATCTGTTAGTGGAAAATTCTACATTACGACAAATAATGCGTGGGGTATAGGTGCGTTCAGTAACTTTCAATTCGGAAGTGCGGCAGTTACCTCTGTGTCTAAAGACTCAGGACCAGTAGAGAACGTCACTATGTCTGGTGTTGTTTCCGGTGGCAGTAGTTATTGCACATGGATGGGTGCTGTCCGTACGCGTCGAAGAAAGATAACAGGTGACGCCACAGAGTATGAAATGATTGTGCTCAAGCGAGGCGAAGATTATGATGACAGCGCAAGTACAGGCGCTGGTGGAACCAAAGTGATTAATCTTAGCCTACAGAATATGCTGAATGAGAAATTCTTTCTCGATGCACCTGTTGTTAAACTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f5251b6b7ce49c7225ff9c180d9db6dbf8e0c5ac7ff450901956316d8b1aa552
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_1 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank