Protein

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Genbank accession
QIW89966.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANILDGVVPSLLQGVSQQIPRERLPGQLSEQVNMVSDLVTGIRRRPGIQYIDSISSLGAINPLSVLSQYVELDTTGWHVFLDAKQGNIITFKEDFTVKQVTPAPYVATSDGKADKLRMVVDAGFVWVLNTEKKPVLINQDTGKQDPGRTGFVWVKTGAFSKQYTVTVNVVQAGTPSTFTKTYTTPTGQNAGDAAHSTPEGVSTGLFDLLNGVDKPAWLTVVRDGAYLAFTIAAGYSECTVSTPSGNSYLGTSSDMTVQLITDLPPNLPAGTDSFVCAVGSSSKALQYYKWILSTKTWQETGAYGSYTAIGDMPQRFDISPTGVANITAPLFEGRVSGDDENNPYPQFIGKSLTGISAYQGRLVLMSGAYLHFSASNKPTRFMRSTVTQVLSEDPIERGSGSATAASYTYAVPYNRDLIAISATHQSVVPASNSGISPQSAVVLLSTKQAIDTLAQPTVVGRSLMYCAPISSDYFGIGELLPSDTTSSQYITNELTNHIPRYMRGRCRSIAASSAASIALFTSSVDVREVLVHEYLWTSTEKLQSAWHKWVAPLDVLSVHFAKDILVLALQSGSSLLLCTLDTRDSSYYSNGELKPLLDLYSTVNVVDAGDYKTAAMPSWLVGVDVNLLGASSTVPGLVGEPVQVLGVDGGTLKMHRSYSGSTVVLGFKYNSVLGLTPPVMKDQNGYAISLDKTTLLRYVPTVQNTGDFDVTISTPKTGELLDDDGHVLKWASHELGLKRSRVAGQSTIIIPCRTIANETECTFSTGSTRELNVIGVEYTVKTVRKRQRM
Physico‐chemical
properties
protein length:790 AA
molecular weight: 85133,36390 Da
isoelectric point:6,04923
aromaticity:0,08101
hydropathy:-0,06203

Domains

Domains [InterPro]
DC_0058
STR
1–790
DC_0058
IPR058003
TTP
7–790
IPR058003
QIW89966.1
1 790
Architecture
STR
STR 1-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW89966.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9724
Central domain 142 340 200 0,1078
C-terminal 341 790 449 0,2290
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PS
[NCBI] 		2723762 Uroviricota > Caudoviricetes > Autographivirales > Savitribaivirus > Savitribaivirus PS
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW89966.1 [NCBI]
Genbank nucleotide accession
MT259468 [NCBI]
CDS location
range 21525 -> 23897
strand +
CDS
ATGGCTAATATTTTAGACGGTGTAGTACCCTCGCTCTTGCAGGGTGTGTCGCAGCAGATACCCCGAGAGCGTCTACCGGGCCAGTTATCCGAACAGGTTAATATGGTGTCAGACTTGGTTACAGGTATCCGTAGACGCCCCGGTATCCAGTACATAGATAGTATCAGTAGCCTCGGCGCTATCAATCCCCTATCTGTGCTGTCCCAGTACGTAGAGTTAGATACTACAGGGTGGCATGTGTTCCTTGATGCAAAGCAAGGGAATATCATTACCTTCAAGGAGGACTTCACAGTTAAGCAGGTAACACCTGCTCCGTATGTAGCCACCTCGGACGGTAAAGCTGACAAGCTGCGTATGGTAGTGGATGCTGGGTTTGTGTGGGTGCTGAATACAGAGAAGAAGCCTGTACTCATTAATCAGGACACTGGTAAGCAAGACCCTGGTAGGACAGGTTTTGTATGGGTAAAGACAGGTGCATTCTCCAAGCAGTACACAGTCACTGTTAACGTAGTGCAAGCAGGTACGCCCAGTACATTCACTAAGACGTACACTACACCCACAGGACAAAATGCAGGGGATGCTGCACACAGTACACCCGAGGGTGTCTCTACTGGGTTATTTGATTTGCTCAATGGTGTGGATAAACCTGCATGGTTGACTGTAGTGCGGGATGGGGCATACCTAGCCTTTACTATTGCAGCAGGGTACTCCGAATGTACTGTCAGCACCCCATCTGGTAACTCGTACTTGGGTACATCCTCGGATATGACTGTACAGCTCATTACGGATTTACCTCCAAATCTACCAGCAGGTACAGACAGCTTTGTATGTGCAGTGGGTTCTAGTTCTAAAGCCTTGCAGTACTACAAGTGGATTCTGTCTACCAAGACTTGGCAAGAGACTGGTGCTTATGGCTCGTATACCGCTATTGGCGACATGCCCCAACGGTTTGATATATCCCCTACTGGTGTCGCTAATATAACTGCACCCCTCTTTGAGGGCCGTGTATCCGGTGATGATGAGAACAACCCGTACCCACAGTTCATAGGTAAGTCACTTACTGGCATCAGTGCGTATCAGGGTAGGCTTGTGCTTATGTCAGGGGCGTACTTGCACTTCTCTGCCAGTAATAAGCCAACTCGCTTCATGCGAAGCACTGTTACTCAGGTTCTGAGTGAAGACCCCATTGAGCGTGGCAGTGGTAGCGCTACAGCGGCATCCTATACATATGCCGTACCTTATAATAGGGATTTGATTGCGATCAGTGCTACACATCAATCTGTAGTACCTGCGTCTAACTCGGGTATATCGCCACAAAGCGCGGTTGTACTGCTCAGTACAAAGCAGGCTATAGATACATTAGCGCAACCTACTGTAGTAGGGCGGTCTTTGATGTACTGTGCGCCTATATCCTCGGATTACTTTGGTATAGGTGAATTGTTACCGAGCGACACTACTTCCTCCCAGTACATCACTAATGAGCTAACTAACCACATCCCGCGCTATATGCGTGGTAGGTGTCGCAGTATAGCCGCCTCATCTGCTGCTAGTATTGCTTTGTTCACATCCTCTGTAGATGTACGTGAAGTGCTGGTGCATGAGTACCTGTGGACTTCTACTGAGAAGTTACAGAGTGCTTGGCATAAGTGGGTGGCCCCGTTGGATGTCTTATCTGTGCACTTCGCTAAGGACATCCTAGTACTAGCGTTGCAGTCCGGTAGCTCGTTGTTGCTGTGTACCCTAGATACACGGGATAGCTCGTACTACTCTAATGGGGAATTAAAGCCGCTGTTGGATTTGTACAGTACAGTTAACGTTGTGGATGCTGGAGATTACAAAACAGCAGCTATGCCTAGCTGGCTCGTGGGTGTCGATGTCAATCTGTTAGGTGCCAGCAGCACCGTGCCGGGCCTTGTAGGGGAACCTGTACAGGTACTTGGTGTAGATGGTGGTACTCTGAAGATGCACCGTTCGTACAGTGGTAGTACTGTTGTACTTGGGTTTAAGTACAACTCAGTACTGGGTCTGACCCCACCTGTGATGAAAGACCAAAACGGCTACGCTATCTCATTAGATAAGACCACATTGCTACGGTATGTGCCGACTGTGCAGAACACTGGGGACTTCGATGTAACTATAAGCACACCTAAGACCGGAGAGCTTCTAGATGATGATGGGCATGTGCTTAAATGGGCCTCCCATGAACTAGGTCTGAAGCGTTCTCGTGTAGCGGGTCAAAGCACTATCATTATACCATGTAGAACAATAGCTAATGAGACTGAGTGTACATTTAGTACGGGCAGTACGCGGGAGCTTAATGTTATAGGTGTAGAGTACACAGTCAAAACTGTACGCAAACGTCAACGTATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b84514250970b5dcb079829c737bbd0ed252b2f81ceea8631f898749fcab4444
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3053
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas phage PS Tagunde,S.N., Newase,S.K., Nagar,V., Kapadnis,B.P. and Pandit,S.V. 2013-05 — GenBank