Protein

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Genbank accession
YP_009908496.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNILRKLMQSLCGCGKHDDCENGQSLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK
Physico‐chemical
properties
protein length:89 AA
molecular weight: 9859,28790 Da
isoelectric point:4,95940
aromaticity:0,01124
hydropathy:-0,26629

Domains

Domains [InterPro]
DC_0291
ATT
1–27
DC_0291 IPR009640
YP_009908496.1
1 89
Architecture
ATT
RBD
ATT 1-27 | RBD 28-89
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stx converting phage vB_EcoS_P27
[NCBI] 		1792287 Uroviricota > Caudoviricetes > Sepvirinae > Traversvirus P27 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009908496.1 [NCBI]
Genbank nucleotide accession
NC_049925.1 [NCBI]
CDS location
range 41017 -> 41286
strand +
CDS
ATGAATATTTTGAGAAAGCTTATGCAGAGTCTGTGCGGTTGCGGAAAGCATGATGACTGTGAAAACGGGCAGTCGCTTACAGCACAACTGCGACTGGGACCGGCAGACATTCTGGAGTCAGATGAGAATGGCATTATTCCGGAGCAGGACAGGGTAATCACACAGGTGGTGATACTGGATGCAGATAAAAAGCAGATACAGTGTGTGGTAAGACCGCTGCAAATCCTGCGTGCTGACGGGACGTGGGAAAATATTGGCGGGATGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2208186af2631a32aed67bfc1c7e785553420d702753e52bd574cff78830f65b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7255
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Interplays between Shiga toxin-converting bacteriophages: plausible roles of RNA polyadenylation, oop RNA and the exo-xis region Gasior,T., Los,J.M., Nowicki,D., Licznerska,K., Dydecka,A., Bloch,S., Topka,G., Los,M., Wrobel,B., Nejman-Falenczyk,B., Szalewska-Palasz,A., Wegrzyn,G. and Wegrzyn,A. 2017-08-25 — GenBank