Protein

View in Explore
Genbank accession
YP_009593332.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MIKIIYKQDPLSEDKTIEHAETLGQWLTSKYDHMPEHVRIFHTTSNMDHAEISFANEVTPKNAYELKQLDFLPGTFIVIENPKGMDPITLAWIVVASIVMGVAVALLMPVPSITQTNQNNNQSSSANNELSNRENKTRVNGRIADIYGAAHDTPDLITVPYKVYENNVEVEHLVGCIGRGHYKINGAYDGETNIVDIAGASVEVYQPGVDIVSGEPYFSLGTEITTPPLTVQHQNSVNGQILRPADTQSLEGTNYLLFAYPNEILRASANNTDLTTKFVSNDRVEITNASFTYNGQTYDLNGTYSVLSVADDRMTLSNPAAVNANWLKLKELNNQQTAALSPKISSIGEKWIGPFILDNVERSRVLCNFVATNGLYTVSSGGNQAAVNVTIEVEVTPVNESGAAIGNPMLKQIILKGSAKSRQTVGATLDMVTFQGRCSVRARRLTPTPAVTTVVDEVKWQALYGAYPLQSTVYEHETVFRARTYATTGALSVKSRKINFDLQRMLPTYKNGAMTTELFPTSSFADALVSMALDDKIGRRTIDEIDLENIYRTYNDVVDYFGTPLAAEFCTTIDDTNLSFEELVSNLCDAVFCTAYRQNNKLKLYFERPTDNSVMLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVGVRNKWQAHFNAYRLWNKLRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQEGLILTLSHDVDFIAGKSYVIYLQMGDGTVDLIPVTPGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLYQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKFDYNSSPAKREYIVPAASELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAFGAWSTDPDYNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGAGAPFGRVMTGQPITNDSQDWRWYLNGDFMVVKVTDAEASVPGKGYRTQNDRYGSPLSGDGGGWGQRGTKSTNDGTWNWQYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126246,17220 Da
isoelectric point:5,18709
aromaticity:0,09233
hydropathy:-0,30706

Domains

Domains [InterPro]
DC_0118
STR
1–688
DC_0118 DC_0808
NF040662
Unmapped
360–838
NF040662 IPR007932
YP_009593332.1
1 1148
Architecture
STR
RBD
STR 1-688 | RBD 706-1129 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009593332.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9189
Central domain 244 442 200 0,6761
C-terminal 443 1148 705 0,0900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage YMC11/11/R3177
[NCBI] 		1628721 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter sp.
[NCBI] 		472 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009593332.1 [NCBI]
Genbank nucleotide accession
NC_041866.1 [NCBI]
CDS location
range 888 -> 4334
strand +
CDS
ATGATTAAGATTATTTATAAACAAGACCCTTTATCCGAAGACAAAACAATTGAACACGCCGAAACTTTGGGTCAATGGCTTACTTCAAAATATGACCATATGCCTGAGCATGTCCGTATTTTTCATACCACAAGCAATATGGATCATGCAGAAATTTCATTTGCGAATGAAGTCACGCCGAAGAATGCATATGAATTAAAGCAGCTCGATTTCTTGCCAGGCACTTTCATTGTAATTGAGAATCCCAAGGGTATGGACCCCATAACTCTAGCTTGGATAGTGGTTGCCTCTATAGTTATGGGTGTGGCTGTTGCATTATTAATGCCAGTACCATCAATTACCCAAACCAACCAGAATAACAATCAATCCTCGTCTGCAAATAACGAATTATCAAACCGTGAAAATAAAACTCGCGTAAATGGTCGTATTGCTGATATTTATGGTGCCGCTCACGATACCCCTGATCTGATTACTGTGCCTTACAAGGTATATGAAAACAATGTCGAAGTTGAGCATTTGGTGGGCTGTATTGGTCGTGGTCACTATAAAATTAATGGTGCATATGACGGTGAAACCAATATTGTCGATATTGCCGGTGCATCGGTAGAAGTCTATCAACCGGGTGTCGATATTGTCTCGGGTGAGCCATATTTTTCGCTTGGTACCGAAATTACAACTCCACCCTTAACGGTTCAGCATCAAAACTCGGTGAATGGCCAGATCTTGCGTCCGGCAGATACTCAAAGCTTGGAAGGTACCAACTATCTTCTTTTTGCCTATCCAAATGAGATCCTGCGTGCATCTGCAAACAATACTGATTTAACCACTAAGTTTGTTAGTAATGACCGGGTAGAAATCACAAATGCTTCGTTTACTTACAACGGCCAGACTTATGATTTAAACGGCACTTACAGCGTTCTATCGGTAGCAGATGATCGAATGACGTTATCAAATCCGGCGGCCGTTAATGCTAACTGGTTAAAGCTTAAAGAGTTAAATAACCAACAAACTGCAGCTTTGTCACCAAAGATCAGTTCAATAGGTGAAAAATGGATTGGTCCATTCATTCTGGACAATGTTGAACGTAGCCGGGTGCTGTGTAATTTTGTGGCCACAAATGGACTTTATACCGTTTCTTCAGGTGGGAATCAGGCCGCTGTTAACGTCACGATTGAAGTTGAAGTAACACCGGTAAATGAATCTGGTGCAGCGATTGGTAATCCGATGCTGAAGCAGATCATTTTGAAAGGTTCGGCAAAGTCGCGTCAAACCGTTGGCGCAACGCTGGATATGGTGACATTTCAAGGTCGCTGTAGTGTCCGTGCACGTCGTTTAACACCAACACCGGCGGTTACAACGGTAGTAGATGAAGTAAAGTGGCAGGCGCTTTATGGTGCTTATCCTTTGCAAAGCACAGTGTATGAACATGAAACGGTTTTTCGTGCGCGCACTTATGCAACCACTGGAGCTTTATCTGTTAAGTCCCGCAAGATCAATTTTGATCTTCAGCGAATGTTGCCGACTTATAAAAATGGGGCAATGACGACAGAGCTATTTCCAACATCGAGCTTTGCTGATGCTTTAGTATCTATGGCACTGGACGACAAGATTGGCCGCCGTACGATTGATGAGATTGATCTTGAAAACATCTATCGGACTTATAACGATGTAGTGGATTATTTCGGTACACCACTTGCGGCTGAGTTCTGTACTACGATTGATGATACAAACCTATCTTTTGAAGAGCTGGTCTCCAATCTATGTGATGCAGTGTTTTGTACCGCATATCGGCAAAACAATAAGCTCAAGCTTTATTTTGAACGGCCAACTGATAACTCGGTAATGCTGTTTAACTTCAGGAATATCATTCCGGATAGTTACAAGCATGACCTGACCTTTGGCGTGATGGATGACTACGATGGACTGATCTATGAATACACTGATCCGACCGACGATAGTCGTATCAATATCTATTTGCCAGACAAAGGAGCAAAGAACCCGAAAGAAGTGAAGTCTGTTGGTGTACGGAACAAGTGGCAAGCTCATTTCAATGCTTACCGGCTCTGGAATAAGCTTCGGTTTCAACGTAAATCCATTACCTTTGATGCGGCACCAGAATCAGAATTACTGGTTTTACGTGACCGGATCGCTGTAGCTGATTATCGCAATGGTATTCATCAAAGCGGTGAGGTGGTACAGCAAGAAGGTTTAATTCTCACCCTAAGCCATGATGTCGATTTCATTGCAGGCAAGAGTTATGTGATTTATTTGCAAATGGGGGATGGTACCGTGGACCTGATTCCCGTTACGCCGGGTTCAGCCAAGAACAAAGTAGTTTTAGGGCGTTTACCGAACGGGGCCTTAAAGCTTAGTCCCGATGACTTTGTGAATACTATCTACACCGTAGTTAATGACGATACCAAAGGCTCACTGCCTTATCTGGTTGCAAAAAGAGAACCGGCTGACCAGTTCTCTAATACCATTACTGCAATTAATTACGATGAACGTTATTACCTCAATGACAAGGACTTTATTGATGTGCCGGTTGATGATTCACCGATTTACATTCGATATGACCAGCTGGATATTAATCTGGCACGTTTATATCAGATGCAAAGAGGGGATTTGCCAACGACTGGAGAAATCAGTTTTGTAGTTGAAGCAGGTGCACTAGTTTCAAGTTCAAGTTCTTATCGACCGGAAACCAGATTTGTCTATAAATTCGACTATAACTCTAGTCCTGCAAAACGAGAGTATATCGTTCCAGCTGCATCAGAATTACCTGCTATTGATACTGGTGAGTTCCCACCTGATCTCGTGGTAAATTTGACTATTAAAGGTGCTGTTGTTGGACGTGGTGGAGATGGCGGGTTGCCACATTTGGCATTTGGTGCATGGTCTACCGATCCGGATTATAACTTTACTAAAACCCGCCGTGACGGTTTTCAGGGAGCACCCGGTTTATTAAACCGGCACAGTAAACTAAACCTGATTATTGATGGTGGAACTCTGGCTCGAGGCGGCTCAGGTGGTGGAGCAACACCAAGCGGTATTTATACAGGATTATCGTATGGAGTTCAGGGTATTCCCGGTGGAGCTGGAGCACCTTTTGGTCGGGTTATGACCGGACAACCTATTACTAACGATTCACAAGACTGGCGTTGGTACTTAAATGGTGACTTTATGGTTGTCAAAGTAACCGATGCCGAAGCTTCGGTACCCGGTAAAGGTTACCGAACCCAAAATGATCGATATGGATCTCCATTGTCTGGTGATGGTGGAGGTTGGGGCCAGCGCGGTACCAAGTCCACCAATGATGGAACATGGAATTGGCAATACCATGGCACAACTGAAGGCCAGCCGGGGCCGGGTGGACCTGCAATTGTTGGGGTGGCACCTCTAACAACTCAATTGATTAACGGAGGGAAAATCTTACAAACCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
86e15354662bed181f675014e4cd27ff9f37bd6011be2be32b6b6a930730bcdc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Acinetobacter phage YMC11/11/R3177 Jeon,J., Yong,D. and Lee,K. 2015-10-01 — GenBank