Protein

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Genbank accession
AGH31356.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVTTPIFGIPEIASQQDQPEVTHNEALILIQILMTGAEGQQNTPPGGPSEGQVYIVGDTPTGAWAGRPNKVAIYYGGAWRFLPGVDDSGSSIDIGATHEGIRVYRKDLSALTVWDGAAWVELAYPSL
Physico‐chemical
properties
protein length:127 AA
molecular weight: 13538,00570 Da
isoelectric point:4,39140
aromaticity:0,08661
hydropathy:-0,09370

Domains

Domains [InterPro]
DC_0494
STR
1–124
DC_0494
IPR021251
STR
23–120
IPR021251
AGH31356.1
1 127
Architecture
STR
STR 1-124 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Tetraselmis viridis virus S20
[NCBI] 		754070 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Tetraselmis viridis
[NCBI] 		748148 Eukaryota > Viridiplantae > Chlorophyta > Chlorodendrophyceae > Chlorodendrales > Chlorodendraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH31356.1 [NCBI]
Genbank nucleotide accession
HQ632857.1 [NCBI]
CDS location
range 14903 -> 15286
strand -
CDS
ATGGTCACCACCCCGATTTTCGGCATTCCAGAGATAGCGTCCCAACAGGACCAGCCTGAGGTCACCCACAATGAGGCCCTCATCCTCATCCAGATTTTGATGACCGGCGCTGAGGGCCAGCAAAACACGCCACCTGGTGGTCCTAGTGAGGGCCAGGTCTACATTGTGGGGGACACGCCCACCGGCGCATGGGCTGGCAGACCCAACAAGGTGGCAATCTACTATGGAGGTGCGTGGCGCTTCTTGCCAGGAGTGGACGACTCTGGCAGCTCAATTGATATTGGTGCGACCCATGAGGGAATCAGGGTCTACCGTAAGGACCTCAGCGCGCTGACTGTGTGGGACGGCGCCGCCTGGGTGGAGTTAGCATATCCCTCACTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d0677b19940a930289e2de6ffe03af0ffbecfe9acb24c3b6454966dd45e9c0d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Tetraselmis viridis virus S20 Henn,M.R., Stepanova,O., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2012-02-15 — GenBank