Protein

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Genbank accession
QAY02273.1 [GenBank]
Protein name
virulence-associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MGDQGYPNKTIYAETVMNADDIKVSNNASAETRVYFDDPMMAEGGKEYAIVIITENSDYTMWVGTRTKPKIDKPNEVISGNPYLQGVLFSSSNASTWTPHQNSDLKFGIYTSKFNETATIEFEPIKDVSADRIVLMSTYLTPERTGCTWEMKLILDDMASSTTFDQLKWEPIGNYQDLDVLGLARQVKLRATFESNRYISPLMSSSDLTFTTFLTELTGSYVGRAIDMTEAPYNTVRFSYEAFLPKGTKVVPKYSADDGKTWKTFTKSPTTTRANNEFTRYVIDEKVKSSGTNTKLQVRLDLSTENSFLRPRVRRLMVTTRDE
Physico‐chemical
properties
protein length:323 AA
molecular weight: 36592,78190 Da
isoelectric point:5,38700
aromaticity:0,10526
hydropathy:-0,50495

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY02273.1
1 323
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,8471
Central domain 232 312 82 0,0226
C-terminal 313 323 10 0,9627
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-312
C-terminal
313-323

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage CH1
[NCBI] 		2510150 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY02273.1 [NCBI]
Genbank nucleotide accession
MK331930 [NCBI]
CDS location
range 41098 -> 42069
strand +
CDS
ATGGGTGACCAAGGTTATCCTAATAAAACAATCTATGCAGAAACAGTTATGAATGCTGATGATATTAAAGTATCTAATAATGCTAGTGCTGAAACTAGAGTATACTTTGATGACCCTATGATGGCTGAAGGCGGTAAGGAGTACGCTATTGTTATTATTACTGAGAACAGTGATTATACAATGTGGGTAGGTACTAGAACTAAGCCTAAAATTGATAAACCTAATGAGGTTATTTCAGGTAATCCATACCTACAAGGTGTATTATTCAGTTCATCAAACGCATCAACATGGACTCCTCACCAAAACTCTGACCTTAAATTTGGTATTTATACTTCTAAATTTAATGAGACAGCAACGATTGAATTCGAACCAATTAAAGATGTATCAGCGGATAGAATAGTTCTTATGTCTACGTACTTAACTCCTGAGAGAACAGGATGTACGTGGGAAATGAAATTAATTCTAGATGATATGGCATCTTCTACAACATTCGACCAATTGAAATGGGAGCCTATCGGTAACTATCAAGACTTAGATGTTTTAGGTCTAGCAAGACAAGTTAAGTTAAGAGCAACTTTCGAATCTAATAGATATATCTCACCATTAATGAGCTCTAGTGATTTAACATTCACTACATTCTTAACAGAGTTAACAGGTTCATATGTTGGTAGAGCTATTGATATGACAGAGGCTCCTTACAATACAGTAAGATTTAGTTATGAAGCTTTCTTACCTAAAGGTACTAAAGTTGTTCCTAAGTATTCTGCGGATGATGGAAAAACTTGGAAAACATTTACTAAATCCCCTACAACTACTAGAGCCAATAATGAGTTTACACGCTATGTCATTGACGAGAAAGTAAAATCATCAGGAACAAATACTAAACTACAAGTTAGATTAGATTTATCAACTGAAAATAGCTTTTTACGTCCTCGTGTTCGTAGACTTATGGTTACTACTAGGGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac3c9c9fa5bd3783346d62c3ff69a22448cb160d44bb760229a585f6a6508c5a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8458
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition, strain of bacteriophage Escherichia coli, used for obtaining thereof patent RU2518303 Dyatlov,I.A., Aleshkin,V.A., Aleshkin,A.V., Afanas'Ev,S.S., Svetoch,E.A., Volozhantsev,N.V., Efimova,O.G., Vasyliev,D.A., Zolotukhin,S.N., Amerkhanova,A.M., Kiseleva,I.A., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Bannov,V.A. and Rubalskiy,M.O. 2019-04-29 — GenBank