Protein

View in Explore
Genbank accession
YP_010645910.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MQIWIHDKSMRKVCALNNEIPGMLPYTNSQWHQYLEYSTSTLDFTIPKFVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAEIERPLASVDGAKTLEWYLQTLDLLGFAGLEVGFNEIPDRTRTITFESQNGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYQRPDENHHGIGKVRGDVTLYYQTGLKGVQVTSDKTQLFNAGYFVGKDGLTLGSVVFEEKNELGQVEFYSFKDSPMVYAPLSADKYPSHMNTTNEDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFIGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPVLKQGDKIVDATYRFVIDGTIKYSGMTYDMVASEIIQPTTLTVAAWVDDKEVASEEVTFVNVSDGKQGPKGDRGEQGPKGDRGNDGLPGKDGVGLKTTTVTYGLSDSDSIQPTNWTSQPPTLIKGKYLWTKTVWTYTDSSSETGYQKTYIAKDGNNGNDGIAGKDGVGIKKTTITYAQGTSGTTAPASGWSSQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGETGPKGDRGERGLQGLQGIQGPKGDQGIPGPKGADGKTQYTHIAYADTISGSGFSQTDINKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGKDGIPGKPGADGRTSYVHFAYADSADGQKGFSLTQTGNKRYLGVCTNFIKEDSTNPADYTWSDTAGGITIGGENLIVNSAFPENLDGWGFWNESTPNENLHIATHDFYYNSSKKLFRLDNNGKGGVPAASRRFKVKRNTDYSFNIQTFATWNIKGVDIYFLGRKSNETDKEFTKVVNLKTHTGSPSVTQSVKWHLTFNSGDCDEGYIRIDNKGTTDGNTSMLFFAELDCYEGTTDRSWQMSPKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQNFVNSNNANRAQAEKDLADASARVTKLENNLNDMSERWSFIDSYMTASNEGLVIGKKDNSSSIMFNPNGRISMYSAGSEVMYISQGVIHIENGIFSKTIQVGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1161 AA
molecular weight: 129584,03270 Da
isoelectric point:5,16038
aromaticity:0,10853
hydropathy:-0,61507

Domains

Domains [InterPro]
DC_0002
STR
1–633
DC_0002 IPR008160 DC_0002
IPR010572
ENZ
141–381
IPR010572 PTHR24637 Coil
G3DSA:1.20.5.320
STR
492–539
G3DSA:1.20.5.320 DC_1971
YP_010645910.1
1 1161
Architecture
STR
STR
STR 1-633 | STR 653-1161
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC875
[NCBI] 		2365043 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010645910.1 [NCBI]
Genbank nucleotide accession
NC_070674.1 [NCBI]
CDS location
range 15641 -> 19126
strand +
CDS
ATGCAAATCTGGATTCATGATAAAAGTATGCGTAAAGTGTGTGCTTTGAATAATGAAATTCCCGGAATGTTGCCATATACGAACAGTCAATGGCATCAATATCTTGAATACTCAACAAGCACGCTTGACTTCACAATTCCTAAGTTTGTAAATGGAAAACTTCACGATGATATTAAATACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAACTTGGAACTAGCAGCAGAAATAGAGCGGCCGTTAGCTAGTGTTGACGGTGCTAAAACACTTGAGTGGTATCTTCAAACCCTTGATTTACTTGGTTTTGCTGGCCTTGAAGTTGGTTTCAATGAGATTCCTGATAGGACAAGAACTATCACGTTTGAATCACAAAATGGTACAAAACTAGAACAGCTTCATAGCTTGATGAATCAATTCGATGCAGAGTTTGTTTTTCGTACAGATTTAAACCGAGATGGTACTTTAAAAAAATTTGTCATTGACATTTACCAACGACCAGATGAAAACCATCACGGCATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGTTTGAAAGGCGTTCAAGTTACTAGTGATAAAACGCAACTATTTAACGCTGGATATTTTGTTGGAAAAGACGGACTAACGCTAGGAAGCGTTGTGTTTGAGGAAAAGAATGAGCTAGGACAAGTAGAGTTCTACTCATTTAAAGACAGTCCGATGGTTTACGCACCTTTATCAGCAGATAAATATCCATCACACATGAATACTACCAATGAAGATAGATGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTACGTACTATCAAGCAGTATGCTTATCCACTAATGACTTATACTGTCAGCGTTCAATCTAGTTTTATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTATAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCCACAAACAACTCGGTTGTTTTTACTAATTTCAGAAAATTGGATAATAAACCGTCTAGCGAATTACAACAACGTATCGATGAGATTGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACGAATGGTACAGTATTTAAGAATGGTATTGGTCGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACCTATCGATTTGTGATCGACGGAACAATTAAATATTCTGGTATGACTTATGATATGGTAGCGTCAGAAATCATTCAACCAACAACATTGACGGTTGCCGCATGGGTGGATGATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGACGGTAAACAAGGGCCTAAAGGAGACCGTGGTGAACAAGGTCCTAAAGGCGATAGAGGTAATGACGGACTGCCCGGTAAGGACGGTGTAGGCTTAAAAACTACCACCGTTACTTACGGTCTAAGTGATTCTGATTCTATTCAACCTACTAACTGGACCAGTCAACCACCAACTTTGATTAAAGGGAAATATCTATGGACCAAAACAGTATGGACATATACGGACTCATCTAGTGAAACTGGGTATCAAAAAACTTATATTGCTAAAGATGGTAATAACGGAAATGACGGTATAGCTGGTAAGGACGGCGTAGGAATTAAAAAAACCACAATTACTTACGCACAAGGAACATCTGGAACAACCGCTCCAGCAAGTGGCTGGAGTAGTCAAGTACCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGATAACACTAGTGAAACTGGATATTCAGTAGCTAAAATGGGCGAAACAGGTCCTAAAGGCGACCGTGGCGAGCGAGGTTTGCAAGGCTTACAGGGTATTCAAGGACCCAAAGGTGACCAAGGGATTCCCGGACCTAAAGGTGCTGACGGAAAAACGCAATATACACATATAGCTTATGCCGACACAATCTCAGGTAGTGGCTTTAGTCAAACAGATATCAATAAAGCCTACATTGGGATGTACCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGATTATCGATGGTCTAAGTGGAAAGGTAGCGATGGTAAAGATGGGATTCCTGGTAAGCCTGGGGCAGACGGACGTACGTCTTATGTTCACTTTGCTTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTAACTCAGACTGGAAATAAACGCTATTTAGGTGTATGCACCAACTTCATCAAGGAAGATAGCACAAACCCAGCAGATTATACATGGAGTGACACGGCTGGCGGTATCACAATCGGCGGTGAAAACCTAATCGTTAACTCAGCATTTCCAGAAAATCTTGATGGATGGGGTTTTTGGAACGAAAGTACACCTAACGAAAATCTTCATATAGCAACACATGATTTTTATTACAATAGTTCAAAAAAACTATTTAGACTAGATAATAACGGCAAGGGGGGAGTTCCTGCTGCATCAAGACGTTTTAAAGTTAAACGCAATACAGATTATTCGTTTAATATTCAGACATTTGCAACATGGAACATCAAAGGTGTAGACATCTATTTTCTTGGTCGCAAGTCGAATGAAACAGATAAGGAATTTACTAAAGTGGTCAACTTAAAAACACATACAGGTTCACCGTCAGTAACACAATCTGTTAAATGGCACTTGACTTTTAACTCTGGAGATTGCGACGAAGGGTACATTCGCATTGATAACAAAGGTACTACTGACGGTAATACGTCTATGCTATTCTTCGCAGAACTAGACTGCTATGAAGGTACGACTGACCGATCTTGGCAAATGTCTCCTAAAGATTTGGAAGAGGAAATAGATACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACTCAAACAACGCCAATCGTGCGCAAGCCGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAGAATAACTTAAACGATATGTCAGAGCGTTGGAGTTTTATCGATAGCTACATGACTGCATCAAATGAAGGTCTTGTCATAGGGAAGAAAGATAATTCCAGCTCTATCATGTTCAACCCTAACGGTCGCATTTCAATGTACTCGGCAGGGTCTGAAGTCATGTATATTTCGCAAGGTGTCATCCATATCGAAAACGGTATCTTCTCGAAAACAATCCAAGTTGGTAGATATCGTGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f7fbd78599d59235da1e2212a75f9391137f04f5c6d42a82cb02c98ee24a0f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank