Protein
View in Explore- Genbank accession
- CAH1095200.1 [GenBank]
- Protein name
- major facilitator superfamily protein
- RBP type
-
TSP
- Protein sequence
-
MNATPTHQALQPEYRLLVLLVSIGFFMQALDTTIVNTAIPAMAHHLNEDPLRMHSVVVAYVLSVAACIPLSGWLADRFGVRNTFLSAIIIFTLASLGCGLSQSLNQLLFFRVIQGVGGALLLPVGRLSLLKIIPRTQFLAAMSLMSLAGLLGPLAGPTLGGWLVEVATWHWIFLINIPMGVLGILMTLKVMPNVKEPTVKTFDLIGFVLLVVAMIGWSLGIEHLASPEYSKWFSISLLVVGVIATLWYAYHSHTHQNALFRSRLFRNKIYAIGILGNFFARFGGNALPFVLPLMLQVAFGFEPFIAGLMMIPLVLGSLFSKPIVRPIIQKMGYRRFLLINTTLVGLCIASFAIMTVDTPTWFRALHFFLFGTLNSLQFVGMNTLTLKDLPQQDASSGNSFLSMIMMLSMSIGVALAGTLINVFTDYYGTAHVTTAFHVTLICLGCINIITALIFWQIPKNTPV
- Physico‐chemical
properties -
protein length: 463 AA molecular weight: 50833,29720 Da isoelectric point: 9,55720 aromaticity: 0,11015 hydropathy: 0,84039
Domains
Domains [InterPro]
IPR036259
STR
8–460
STR
8–460
NF007799
Unmapped
15–461
Unmapped
15–461
PTHR42718
Unmapped
15–454
Unmapped
15–454
G3DSA:1.20.1720.10
STR
16–204
STR
16–204
IPR020846
STR
17–462
STR
17–462
IPR004638
Unmapped
17–423
Unmapped
17–423
PR01036
Unmapped
20–44
Unmapped
20–44
cd17503
STR
20–458
STR
20–458
cd17503
STR
21–458
STR
21–458
IPR011701
STR
22–412
STR
22–412
1
463
Architecture
STR 8-463
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
463
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 430 | 430 | 0,4770 |
| Central domain | 431 | 452 | 23 | 0,0305 |
| C-terminal | 453 | 463 | 10 | 0,9879 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-430
1-430
Central
431-452
431-452
C-terminal
453-463
453-463
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1095200.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000037
[NCBI]
CDS location
range 18499 -> 19890
strand +
strand +
CDS
ATGAATGCCACGCCAACCCATCAAGCCTTGCAACCCGAATATCGCCTATTGGTTCTTTTGGTTTCCATTGGCTTTTTTATGCAGGCATTAGATACAACAATTGTAAATACTGCCATTCCTGCAATGGCACACCATTTAAATGAAGATCCATTACGTATGCATAGCGTAGTGGTGGCTTATGTTTTATCTGTAGCGGCCTGTATTCCTTTAAGTGGATGGTTGGCTGACCGTTTTGGTGTTAGAAATACGTTTTTATCAGCAATCATAATTTTCACGCTTGCTTCCTTAGGTTGTGGTCTTTCTCAAAGCCTAAATCAGCTTTTATTTTTCCGTGTCATTCAGGGTGTTGGGGGTGCGTTATTACTCCCTGTTGGTCGTTTATCACTTTTAAAAATTATTCCCCGAACTCAATTTTTGGCAGCCATGAGTCTCATGAGTCTGGCAGGTTTACTAGGCCCTTTAGCTGGTCCAACACTAGGTGGTTGGCTCGTTGAAGTTGCAACGTGGCATTGGATCTTTCTTATTAATATTCCAATGGGAGTATTGGGCATATTAATGACATTAAAGGTCATGCCAAATGTAAAAGAGCCTACCGTTAAAACATTTGACCTTATTGGGTTTGTGCTCTTAGTCGTCGCAATGATTGGCTGGTCTTTGGGTATTGAACATCTTGCCTCACCTGAGTATTCCAAATGGTTTAGTATTTCTTTATTAGTGGTCGGGGTAATCGCAACCCTTTGGTATGCCTACCATTCACATACGCATCAAAATGCATTGTTCCGTAGCCGACTCTTTAGAAACAAGATTTACGCGATTGGTATTTTAGGTAATTTCTTTGCCCGCTTTGGTGGTAATGCCTTACCTTTTGTTTTACCACTCATGCTACAAGTCGCTTTTGGTTTTGAGCCATTCATTGCGGGATTAATGATGATTCCGCTAGTGTTAGGGTCGCTTTTCTCCAAGCCTATTGTTAGACCGATTATTCAGAAAATGGGTTATCGCCGCTTTCTGTTAATTAACACAACTTTAGTTGGTCTATGTATTGCTTCTTTTGCCATTATGACTGTCGACACCCCAACTTGGTTTAGAGCCTTACACTTTTTCTTATTTGGTACATTAAACTCATTACAATTTGTGGGAATGAATACACTTACCTTAAAAGATTTGCCTCAACAAGATGCAAGTAGCGGTAATAGTTTCTTATCAATGATTATGATGCTTTCAATGAGTATTGGTGTTGCACTGGCAGGTACACTCATTAATGTATTTACCGATTACTATGGTACAGCACATGTGACAACTGCCTTCCATGTCACCCTCATTTGTTTAGGCTGTATTAATATCATTACCGCACTGATCTTTTGGCAAATACCCAAAAATACGCCTGTGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3f97ec94c034794ea9e52f8f351533183c939d6009118239cb8760be34a44bce
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50