Protein

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Genbank accession
YAA51040.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIETNSRSYLHISSDITYQGQNFTEVHAEFIPTTEMNFEDVFDYQGKRIRGSWSADGGDLSAPEDTRERRYLCITGKASLRFKGSSIALRMSLNPGWGRAVVLIDGRPPSTIPGLSYARDFASSNAEEFASWGNETRDQLLADNLPDGEHLLEVFCVGNNSKEFFVTSGAKVYNWKKKNLSADKYVINHEEKSQPLTLTVKSTSSDSAINTKLEFDPFFLDPVTHLPIGTVDLPSISDGYPRSVTVVPALTGKEPTSIIPKGVKISYKKRDDVGGTEWVTLEEEVPYTNDAVTINDLWWVDAAGTTAPEELVASTSALATLDIKVKGPKFGLRLWMDYGLGSANVFRNCVKKAGVTNTTGLNTVTVADPAGITVGMWVVGNRFATGTTVTAVNGTTITMSSNATGAGKQVMYFGNYVGTFNCHTDVEEEQRTFKNVSITNLGATFDGVVTVIPAKGNKTFCWSKVVLSTRALFSYIEEEFRVDFNVKQVLPADVKQVKLVNGVVTFETPDGSAYNFNLKEPYDNRHADTVKVEYRFPTFICCYTPGYVELFKEYDIVITDPGALTRKETKMLQDLGIQVYMYVSFGEEDSVRSNIWDMNSTQVPHRGDGLGPGGYASYYMKGGFGYGEFSECTNDNQIHGSKTCAENMPQYFTGVGRCGAPCEKDWRTGYEEWRDGGKCGGGFTSANNWQRDASTACTNSSCRKYQPVHQKCPKFVVRENVWGQDFSIATPNFPDENGIWASYYIEATRRDAGSWFARLRDYYMPLVFQEPTPQEDYPINTRRLLDDGTPVFGVKTTVGALDEQEPFSLVDTVSGFEYQPNIHYSMDKMDGTFIFANLDFEPSPDYVVPFEGQQLRLRYYKRGLGADGVFMDTVDTVDVYPAEEYQAGFAGIVNELKAMYPTKGFCSNRGFSILDRIIDSCSLVMTESVFSEYDFNEGTYHEVTGAAADWNAEVAKSIQELRRNKTFDVVCLNYASNGPDGDQMRDNVSRKCLELGWMPWLSTILLNDPLNNRPYRFEKGYIRSNEWRKIKAINL
Physico‐chemical
properties
protein length:1035 AA
molecular weight: 115657,24790 Da
isoelectric point:5,04966
aromaticity:0,11787
hydropathy:-0,39662

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
49–176
G3DSA:2.60.120.260 DC_0823 IPR013785
IPR017853
ATT
857–1009
IPR017853
PTHR35882
Unmapped
865–1020
PTHR35882
YAA51040.1
1 1035
Architecture
STR
RBD
ATT
STR 49-176 | RBD 318-424 | ATT 857-1016 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VpR
[NCBI] 		3447163 Viruses >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA51040.1 [NCBI]
Genbank nucleotide accession
PV847830.1 [NCBI]
CDS location
range 10223 -> 13330
strand +
CDS
ATGATTGAAACAAACTCCCGCTCGTACCTTCACATCTCCTCGGACATTACATACCAAGGTCAGAACTTCACTGAGGTTCATGCTGAGTTTATCCCGACTACAGAGATGAACTTTGAGGACGTCTTTGATTATCAGGGTAAACGTATCCGTGGGAGTTGGTCAGCAGATGGTGGCGACTTATCAGCTCCTGAGGACACTCGTGAGCGTCGCTACCTCTGTATCACAGGTAAGGCATCCCTTCGCTTCAAGGGCTCCTCTATTGCCCTGAGGATGTCTCTCAACCCCGGTTGGGGGCGTGCTGTCGTCCTAATCGATGGTCGGCCCCCTTCGACTATTCCCGGCCTCTCGTATGCACGTGACTTCGCTAGCTCTAACGCTGAGGAGTTTGCTTCGTGGGGCAATGAAACCAGAGATCAACTGTTGGCAGACAACCTGCCCGATGGTGAGCATCTTCTGGAGGTCTTCTGTGTAGGCAATAACTCCAAAGAGTTCTTCGTGACTTCTGGGGCTAAGGTCTACAACTGGAAGAAAAAGAATCTGAGTGCTGATAAGTATGTTATCAACCACGAGGAGAAGTCCCAGCCACTTACGCTGACCGTGAAGAGTACTTCCTCTGATTCGGCCATTAACACTAAGCTGGAGTTTGATCCCTTCTTCCTCGACCCTGTAACACACTTACCTATCGGCACCGTGGATCTCCCAAGCATCTCTGATGGCTACCCTCGGTCGGTCACTGTGGTTCCTGCCCTTACAGGCAAAGAGCCAACTAGTATCATCCCCAAGGGTGTCAAGATCTCTTATAAGAAAAGAGATGACGTGGGAGGCACCGAGTGGGTCACTTTGGAGGAAGAAGTACCTTACACCAACGATGCCGTGACTATTAATGACCTGTGGTGGGTTGACGCTGCTGGCACTACAGCCCCAGAGGAACTCGTGGCTTCCACTAGCGCCTTGGCTACTCTGGATATCAAGGTGAAGGGTCCGAAGTTTGGTTTGCGTCTGTGGATGGACTACGGTCTGGGTTCAGCAAATGTCTTCCGTAATTGCGTGAAGAAGGCTGGAGTCACTAACACAACTGGCCTCAACACTGTCACAGTAGCTGACCCCGCAGGTATCACCGTTGGTATGTGGGTCGTTGGTAACCGCTTCGCAACTGGCACTACAGTCACTGCGGTAAACGGAACCACAATCACCATGTCCAGCAATGCTACTGGGGCTGGCAAACAAGTGATGTACTTTGGTAATTACGTTGGGACATTCAATTGCCACACTGACGTAGAGGAAGAGCAACGTACCTTTAAGAATGTCTCGATCACCAACTTAGGTGCAACCTTTGATGGAGTGGTCACTGTTATCCCTGCGAAGGGCAACAAGACGTTCTGCTGGTCGAAGGTGGTTCTGTCTACCCGAGCCCTCTTTAGCTACATCGAAGAGGAGTTCCGAGTGGACTTCAACGTCAAGCAAGTGCTGCCTGCGGATGTGAAGCAGGTCAAGCTGGTTAATGGTGTTGTCACCTTTGAGACACCTGACGGTAGTGCCTATAACTTCAACCTCAAGGAACCGTATGATAACCGTCATGCCGACACCGTAAAGGTTGAGTATCGCTTCCCAACGTTCATCTGTTGCTACACTCCGGGTTACGTCGAGCTGTTCAAAGAGTACGACATTGTGATCACCGACCCAGGCGCCCTTACTCGTAAAGAGACTAAGATGCTCCAAGACCTCGGTATCCAAGTCTACATGTATGTCTCCTTCGGCGAAGAGGATAGTGTCAGGAGTAACATCTGGGATATGAACTCTACTCAGGTTCCACACCGAGGAGATGGCTTGGGCCCCGGTGGGTATGCCTCGTACTACATGAAGGGTGGCTTTGGTTACGGTGAGTTCTCGGAATGCACCAACGATAACCAGATCCATGGTTCGAAGACTTGTGCTGAGAACATGCCACAATACTTCACTGGTGTTGGACGCTGCGGTGCTCCTTGTGAGAAAGACTGGCGTACTGGATACGAAGAATGGCGGGATGGTGGTAAGTGTGGTGGTGGGTTCACCTCTGCGAACAACTGGCAGCGTGATGCCTCTACGGCCTGTACCAACAGCTCGTGCAGAAAGTATCAGCCAGTTCACCAGAAGTGCCCTAAGTTCGTAGTTCGTGAGAACGTGTGGGGTCAGGACTTCAGTATTGCCACCCCAAACTTCCCTGACGAGAACGGTATCTGGGCTTCGTATTACATTGAGGCAACTCGACGTGATGCAGGCTCGTGGTTCGCCCGTCTGCGTGACTACTACATGCCATTGGTTTTCCAAGAGCCTACCCCTCAGGAAGACTACCCAATCAACACCCGTAGATTGCTCGATGACGGTACTCCTGTCTTCGGTGTCAAGACTACAGTTGGTGCGTTGGATGAGCAGGAGCCATTCTCTTTGGTTGACACCGTGAGCGGCTTTGAATACCAACCAAACATACACTACTCCATGGATAAGATGGACGGCACCTTTATCTTTGCCAACCTCGACTTTGAGCCAAGCCCTGACTACGTTGTTCCTTTCGAGGGCCAACAGCTGAGACTTCGGTACTACAAGCGTGGCCTTGGTGCTGATGGTGTGTTCATGGACACTGTGGACACTGTGGACGTTTACCCAGCCGAAGAGTACCAAGCTGGTTTTGCTGGGATCGTCAACGAACTTAAGGCGATGTATCCAACGAAGGGCTTCTGCTCTAACCGTGGGTTCTCGATCTTGGATCGTATCATTGATAGCTGCTCCCTTGTGATGACCGAGTCGGTGTTCAGTGAGTATGATTTTAACGAGGGGACTTACCACGAGGTTACTGGCGCTGCTGCTGACTGGAACGCTGAGGTTGCCAAGAGCATCCAAGAGCTCCGTCGGAACAAGACCTTTGACGTGGTGTGCTTGAACTACGCATCCAATGGTCCTGATGGTGATCAGATGAGAGATAACGTATCCCGCAAATGCCTTGAGCTTGGTTGGATGCCGTGGCTGTCTACGATCCTCCTGAACGACCCACTCAACAACCGCCCTTACCGCTTCGAGAAAGGATACATTCGGAGCAACGAGTGGCGTAAGATTAAGGCGATCAACTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c38f0da4f477dfc2a9b609056df3776dd9f92eea41acaea268f686ae6b83f1a1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50