Protein

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Genbank accession
YP_009323871.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQITKYTTDKTATDAAIKSINDSIGNINTALGGINTTLDTKAAKGANNDITELNALTKAITIAQGGTGAKTLAGAKTALEVDRLRQQDNGTFVVSPNGKYSLFIYNSGDFGLIDSATSAVSAMKVAFGGTGGTTPKDARKSLNVPVGALAEVIPNGESILNYIAVAGQSGYYSSGDSVTHTPPASEGWWTYNFHCHGVDINGAAQYGVLRAVGLSGSSWINVLDGTGNWTGWQEQFNAQTTVQISRGGYRSK
Physico‐chemical
properties
protein length:295 AA
molecular weight: 30658,84280 Da
isoelectric point:7,75980
aromaticity:0,07797
hydropathy:-0,12441

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 118970_sal2
[NCBI] 		1813782 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus 118970sal2
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009323871.1 [NCBI]
Genbank nucleotide accession
NC_031933.1 [NCBI]
CDS location
range 86051 -> 86938
strand -
CDS
ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCCTATGTTGTAGTTAATAGAGACGCCGCAGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTTGTACTAACTTCCAAATACCTACAAATTACAAAATATACTACTGATAAAACAGCTACTGATGCTGCGATCAAGAGTATTAATGATTCAATCGGTAACATCAATACTGCACTTGGTGGTATCAACACTACTCTAGATACTAAGGCTGCAAAAGGTGCTAATAACGATATTACAGAATTAAATGCACTCACTAAAGCTATTACTATTGCTCAAGGAGGTACCGGAGCTAAAACTTTAGCAGGTGCTAAAACTGCACTAGAGGTAGATCGTCTAAGACAGCAGGACAATGGTACCTTTGTGGTATCTCCTAATGGTAAATACTCCTTATTTATCTATAATAGTGGAGATTTCGGATTAATCGATAGTGCTACTTCTGCCGTTAGTGCAATGAAAGTTGCGTTTGGTGGTACAGGCGGAACCACTCCTAAGGACGCAAGAAAAAGCCTTAATGTACCTGTTGGTGCATTAGCAGAGGTTATACCTAATGGCGAGAGTATATTAAACTATATTGCAGTTGCAGGCCAAAGCGGTTATTATTCTTCAGGGGATAGTGTTACCCATACTCCACCTGCTAGCGAAGGCTGGTGGACATATAACTTCCACTGTCATGGTGTAGACATAAATGGTGCTGCTCAGTATGGAGTACTACGTGCTGTTGGATTATCTGGTAGTTCTTGGATTAACGTTCTTGACGGTACTGGTAACTGGACAGGATGGCAAGAACAGTTCAATGCCCAGACTACAGTTCAAATCTCTAGGGGGGGGTACAGGAGCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fbdeb67dcd6ad8de2b9f24918382984eee02de76593d16d0a96a3400cae65775
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of three Siphoviridae Bacteriophages infecting Salmonella enterica enterica subsp. Enteridis Paradiso,R., Lombardi,S., Iodice,M.G., Riccardi,M.G., Orsini,M., Bolletti Censi,S., Galiero,G. and Borriello,G. 2016-12-29 — GenBank