Protein

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Genbank accession
BAM63090.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKLQQFNGGLRTRPRPQFIDLSQGVVYENINQETGSLAPVMLPKDSGQAVLPYHTFYVAGNKWVSSNIQRYYVEFQKTLYWCDGIGLPQKLNMRGAQTNLGLAAPSTKASFRAVDNPGVVSDVEVKRTEAAGSGLPSELHVYVIVNVDGDAFSNALQLTVDTKGTVNTIAESTPKPIIQPKINSDTSTTKYQVSIGQVKGVTIGSGGVQVYRQYNNKFRLVGTITNGTATVADTVYDIGTNLELDFTKFGALQGVYQYVTTFVNSNDGAESAPSALSEELDLKGGGSIYAYGFPQSEDRQVDKMRLYRVGGNLGEFTLVKELPIATLDYTDATSDASLPGTLLTTQNAAPAPAGLKYMREAYAMLFAAEGSKLRFTPVGRPNEWPETFFLQYDADITGIAPVANGILVFTEYRTHIVTGNGPSVLSTYLLSGDQGCISNESIQFVGAEALWVSSDGICVSSGARINVITRELLGKLDIRPVDSAVYDGQYYVMTDSGLIYCINNGTVKHFRFDISSLAVANDKLYGYNNGTLWELFASTDPAVMRFKSALMTEGSFTLNKVYKKIFTYSAGHIIIRILINGTIVVERVLSGEDSFDIQVPQELQRGFNLQFEVEGTGEVSELEYVVGA
Physico‐chemical
properties
protein length:628 AA
molecular weight: 68391,34100 Da
isoelectric point:5,04096
aromaticity:0,10032
hydropathy:-0,09713

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAM63090.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 480 480 0,9483
Central domain 481 617 138 0,0457
C-terminal 618 628 10 0,1998
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-480
Central
481-617
C-terminal
618-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage KF-1
[NCBI] 		1244856 Uroviricota > Caudoviricetes > Kafunavirus >
Host Edwardsiella tarda
[NCBI] 		636 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAM63090.1 [NCBI]
Genbank nucleotide accession
AB757800 [NCBI]
CDS location
range 32386 -> 34272
strand -
CDS
ATGAAACTTCAACAGTTTAATGGCGGGTTGCGTACCCGCCCTCGCCCGCAGTTCATTGACTTGAGCCAGGGCGTTGTATATGAGAATATTAACCAAGAGACAGGTAGCCTCGCACCTGTAATGCTACCTAAGGACTCTGGTCAGGCTGTGCTGCCTTACCACACGTTCTACGTCGCGGGTAATAAGTGGGTTAGTTCTAACATTCAACGCTATTACGTTGAGTTCCAGAAGACTTTGTACTGGTGCGACGGCATAGGCCTGCCACAAAAGCTGAACATGAGAGGGGCACAGACCAATTTAGGGCTTGCTGCGCCTAGCACTAAGGCGTCGTTCAGGGCTGTCGATAATCCTGGCGTTGTATCTGATGTGGAGGTCAAGCGTACAGAGGCAGCTGGTTCTGGCTTGCCTAGTGAGCTGCATGTTTACGTTATTGTCAACGTAGACGGCGATGCTTTCTCTAACGCGTTGCAGCTGACTGTAGACACTAAAGGCACTGTCAACACTATAGCGGAGTCTACACCTAAGCCCATAATTCAACCCAAGATCAATAGTGATACTTCTACGACTAAGTATCAGGTGTCAATTGGTCAAGTAAAAGGTGTAACCATTGGCTCAGGTGGAGTGCAGGTGTATAGGCAGTACAACAACAAGTTTAGGCTTGTCGGTACTATCACTAATGGCACTGCTACTGTGGCGGATACTGTGTATGATATTGGCACTAACCTTGAGCTGGACTTTACTAAGTTTGGAGCGTTACAAGGTGTGTACCAGTATGTAACAACTTTCGTGAATAGCAATGACGGTGCTGAGTCTGCTCCATCTGCTTTGTCAGAGGAGCTAGACTTAAAAGGCGGTGGCTCAATCTATGCTTATGGCTTTCCGCAGTCAGAAGACCGACAAGTAGACAAGATGCGGCTGTACCGTGTAGGCGGCAACCTTGGTGAGTTTACATTAGTTAAAGAGCTACCCATTGCCACGTTAGACTACACGGATGCTACATCTGACGCCTCACTGCCTGGTACGCTGCTAACTACGCAGAATGCTGCGCCGGCGCCAGCGGGTCTAAAGTATATGCGTGAGGCTTACGCAATGCTGTTCGCGGCAGAAGGCTCTAAGCTTAGATTCACGCCCGTAGGCCGGCCTAACGAGTGGCCCGAGACCTTCTTTCTGCAGTACGACGCAGACATTACAGGGATCGCACCCGTAGCTAACGGTATTCTCGTATTCACAGAGTACCGTACGCACATCGTAACAGGTAACGGGCCTAGCGTGCTATCTACATATCTGCTTAGCGGTGACCAAGGCTGTATCAGTAATGAATCTATCCAGTTTGTTGGTGCAGAAGCACTGTGGGTATCTTCTGATGGTATCTGTGTCTCGTCCGGCGCGCGGATAAACGTTATCACACGAGAGCTGTTAGGTAAGCTCGATATTCGGCCGGTAGACTCTGCTGTATATGATGGCCAATACTATGTTATGACTGACTCCGGGCTTATCTACTGCATCAACAATGGCACTGTGAAGCACTTCAGATTTGACATTAGCTCATTAGCTGTTGCTAACGATAAGCTATATGGTTATAACAATGGCACCCTGTGGGAGTTGTTCGCGAGTACTGACCCTGCTGTCATGCGCTTCAAGTCTGCGCTGATGACGGAAGGCTCCTTTACACTGAATAAAGTCTACAAAAAAATATTTACATATTCAGCGGGTCATATTATAATAAGAATATTAATTAACGGGACTATTGTGGTTGAAAGGGTACTTAGTGGCGAAGACTCATTCGACATTCAAGTACCTCAAGAGCTGCAACGAGGGTTCAACCTGCAGTTTGAGGTTGAAGGTACTGGCGAAGTATCGGAGCTTGAATATGTCGTCGGAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87348194bb516975ee0074fcc69f9082c34ae8ca34a12fa01778c7620f44320c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Edwardsiella tarda-Lytic Bacteriophages KF-1 and IW-1 Yasuike,M., Sugaya,E., Nakamura,Y., Shigenobu,Y., Kawato,Y., Kai,W., Fujiwara,A., Sano,M., Kobayashi,T. and Nakai,T. 2013 23405297 GenBank