Protein

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Genbank accession
XPP59825.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MATLKPIQFKRSKTAGSRPLPEQVLEGELALNLEDRMIFTKDDEGNIIDLGFAKGGRVDGDIVQVGNYTQTGNYTTSGDITAKNINASVGINAAGEVRSSTGVFRTRAREGQNAHLWFEGEEVGEGQNFERGVLYASSQTATSGSIKLRVMNGFDNNKAQALFGFDGSGDITAPRDLVSQRGRFSIEAVAPTINTTRIYTRDKPWRSNSDESYGWLDLVNYVPGENGALALNYVYKGRAMSGGTIWHQLVDERIGPEWALYTGSGPENKAFAVGSSAGKGLGNFTGSLHVGNPGYSAIGNNSITIGETNTGLRQTSAGNLDFLSANNMAFRFSAGEAINRSYNRLHVQHSDANGNAINPPANNAQLQVNTSGDENNAGGNGLTLIGYYAGATGEYNHYFRGKGSASFDMQRGININQGGLNVYNGLTNVGQINLTGSMNTTNVPQGTYKWDDLNIVAADAKSYLRRFRSRNNSTIWHETVEGGIWRLSTGSTDAQEELQISTSGVFKVRGEVIALGNGGASGTGNHFRAVYGNYGFFIRNDGGNTYFMLTNSGDQYGTWNSLRPFAINNGTGKVSMANGVAISGGLKVDPGIESEYVKTYSGRIGHGSWASQNDNEAMIFQRITSASTSEYCPILKQKYIGGNRTWSIGTLISVGSFHIHMKDSAGNDRNFAFQPNGDFNGANTINASAISVGSARLSSIATPGGGQFANDGNVYINKSGFAGWIDALFVKKNGDTMSGTLNLNVNGPGINMNTPAGGSTYVIGRRNGVNGFYVGMGSAGNDATFHSYLYNTTLTLRTADIYFNKKVYGAGDADFNNVYIRSDIRLKRNFKKIENALDKVDKLDGLIYEKKNTRESTEYETTEAGIIAQTLRSVLPEAVSEHEGTLNVSASGTIALLVNAIKELKARVEELESK
Physico‐chemical
properties
protein length:914 AA
molecular weight: 98263,44840 Da
isoelectric point:6,92500
aromaticity:0,09300
hydropathy:-0,42932

Domains

Domains [InterPro]
DC_0538
STR
1–725
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
500–567
IPR048390 IPR048388 IPR030392 Coil
DC_0203
RBD
793–914
DC_0203
XPP59825.1
1 914
Architecture
STR
ATT
STR
STR
ATT
RBD
STR 1-499 | ATT 500-567 | STR 568-725 | STR 747-758 | ATT 759-817 | RBD 818-914
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP59825.1
1 914
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,5140
Central domain 120 318 200 0,4125
C-terminal 319 914 595 0,8373
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-318
C-terminal
319-914

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Gravdalen
[NCBI] 		3374948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP59825.1 [NCBI]
Genbank nucleotide accession
PQ464594 [NCBI]
CDS location
range 158448 -> 161192
strand +
CDS
ATGGCAACTTTAAAACCTATTCAATTTAAAAGAAGTAAAACAGCAGGTTCAAGACCTTTGCCTGAACAAGTATTAGAAGGCGAATTAGCACTGAACCTCGAAGATCGTATGATTTTCACTAAAGACGACGAAGGGAATATTATTGACCTTGGTTTTGCAAAAGGCGGTCGTGTAGATGGTGATATTGTTCAGGTTGGTAATTACACCCAAACCGGCAACTACACTACTTCAGGCGATATTACCGCTAAAAATATAAACGCTTCTGTAGGAATTAATGCAGCGGGTGAAGTTCGTTCTAGTACTGGTGTATTCCGCACTAGAGCTAGAGAAGGACAAAATGCCCACTTGTGGTTTGAAGGCGAAGAAGTTGGAGAAGGACAAAATTTTGAACGAGGTGTTCTTTATGCTTCTTCTCAAACTGCAACTTCTGGCTCTATCAAGCTTCGTGTAATGAACGGGTTCGACAATAATAAAGCGCAAGCTTTATTCGGCTTCGATGGGTCTGGCGATATTACCGCTCCAAGAGATTTAGTATCTCAACGTGGACGCTTTTCTATCGAAGCTGTGGCCCCTACAATTAATACAACTCGTATTTACACAAGAGATAAACCTTGGCGGTCAAATAGCGATGAATCTTATGGGTGGTTAGATTTAGTTAATTATGTTCCTGGAGAAAACGGGGCCCTAGCATTAAACTATGTCTATAAAGGTCGAGCCATGTCTGGCGGAACCATTTGGCATCAATTGGTTGATGAAAGAATAGGTCCTGAATGGGCTCTTTATACTGGTAGCGGTCCTGAAAATAAAGCTTTTGCAGTAGGGTCATCCGCAGGTAAAGGTCTCGGTAACTTCACAGGCAGTTTACATGTAGGTAATCCAGGATATTCTGCTATTGGTAATAACTCTATTACTATTGGTGAAACTAATACTGGTTTAAGACAAACTTCAGCAGGTAATTTAGATTTCTTATCGGCTAATAATATGGCTTTCAGATTTTCTGCAGGTGAAGCCATAAACCGTTCTTATAATCGATTACACGTCCAGCATTCTGATGCTAATGGTAATGCTATTAATCCGCCAGCTAATAATGCTCAACTACAAGTAAATACTTCAGGCGATGAAAATAACGCAGGTGGAAACGGATTAACCTTAATAGGTTATTATGCTGGAGCTACCGGCGAATACAATCATTATTTCCGTGGTAAAGGTTCTGCATCTTTTGATATGCAACGTGGTATAAACATTAACCAAGGTGGCCTTAATGTTTATAATGGTTTAACGAATGTAGGCCAAATTAATTTAACAGGTTCAATGAATACTACTAACGTTCCACAAGGGACTTATAAGTGGGATGATTTGAACATTGTAGCTGCTGATGCTAAATCTTATTTACGTAGATTCCGTTCAAGAAATAACTCAACGATTTGGCATGAAACAGTCGAAGGTGGAATTTGGCGTTTATCTACTGGCTCCACTGACGCTCAAGAAGAATTACAAATTAGTACTAGTGGTGTGTTTAAGGTCAGAGGGGAAGTAATTGCTCTTGGAAATGGTGGAGCCTCTGGGACTGGAAACCATTTCCGTGCCGTGTATGGAAATTACGGATTCTTTATTCGTAATGATGGTGGCAACACTTATTTTATGTTGACTAATTCTGGTGATCAATATGGTACATGGAATAGTTTGCGTCCTTTTGCTATTAATAATGGTACCGGTAAAGTGTCTATGGCTAACGGCGTCGCCATTAGTGGGGGCCTAAAGGTTGATCCTGGTATTGAATCCGAATATGTTAAAACTTATTCAGGTCGTATTGGGCATGGTTCTTGGGCTTCACAGAATGATAATGAAGCAATGATTTTCCAAAGAATTACTAGTGCTTCTACTTCTGAATATTGTCCTATTCTTAAGCAAAAATATATTGGCGGGAATAGAACTTGGTCAATAGGTACTTTGATTAGCGTAGGTTCTTTCCACATCCATATGAAAGATTCTGCTGGTAATGACAGAAACTTTGCTTTTCAACCTAACGGTGATTTTAATGGTGCTAATACCATTAATGCATCAGCTATATCTGTAGGCAGTGCTAGACTTAGTTCTATCGCTACTCCGGGCGGTGGTCAATTTGCTAATGACGGTAACGTTTATATCAATAAATCTGGTTTTGCAGGCTGGATAGATGCACTATTTGTTAAGAAAAATGGTGATACCATGTCTGGTACTTTAAACCTCAACGTTAACGGCCCGGGCATAAATATGAACACCCCTGCGGGTGGTTCTACTTATGTTATAGGTAGGAGAAATGGGGTCAACGGATTTTATGTTGGTATGGGTAGTGCTGGTAATGATGCAACGTTCCATAGTTATTTGTACAACACTACTCTTACCTTACGTACAGCAGATATCTATTTTAACAAAAAAGTTTATGGTGCAGGTGATGCCGACTTTAACAACGTTTATATTCGTTCAGATATTCGTTTAAAACGCAACTTCAAGAAAATTGAAAATGCTTTAGATAAAGTTGATAAACTTGATGGTTTAATTTACGAGAAGAAAAATACTCGTGAATCTACTGAATATGAAACAACTGAAGCAGGTATCATTGCCCAGACTTTACGATCTGTATTACCTGAAGCAGTTTCAGAGCATGAAGGTACTCTTAATGTTTCAGCTTCTGGGACTATTGCTCTGTTAGTTAATGCTATCAAAGAACTTAAAGCTCGTGTTGAAGAACTTGAATCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1bc05ef0215426092230b56146beb4ba3068c499dc17b3390cdada5d85e276f8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50