Protein

View in Explore
Genbank accession
XHV15888.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MALKITITDAGRAELINADNTGTGPVEITHVAFTATAFAPSKTLNAVPDEIKRLSSIAGEVVADDTISVTAKDEGADAYTVRGFGLISEYGTLFAVYSQSAPIIEKSGPTTLLLTTDIILADLPTASLTFGDISFSNPPASLTTPGVTRLSNATDSTAQNLAATPRAVKLANDNANTRLSKAANLADLTNAATARVNLGLGTSATLGNTALRTSSSTTLLLQAAAMNDHRQSGDHDDRYAQRSNNLSDLPSAAQARGNLGLSTAATMGTTASRTSTSTSTVLQAKGMNDHRQSDDHDGRYYQKSEFTDADTPDSPMRRSSAGDVWARLFRSSYSPTNSNIAAIYTTQTIGGDYMRPSTPAQVKAALTLNKNDVGLSNLPNSTTASRTSSSTASLLQAKAMNDHRLSGDHDSRYVRPSDFTRSLGLNQHCALPGGWIHQSGQVSLNALAGTAQSRVINLPTSFPNGMSGLAFAILSDTPQDLRISYAPINNGSFRMFLYSSVNVSNQICKYIATGW
Physico‐chemical
properties
protein length:515 AA
molecular weight: 54301,58270 Da
isoelectric point:6,75852
aromaticity:0,05631
hydropathy:-0,27262

Domains

Domains [InterPro]
IPR010916
1–72
IPR010916 IPR005068 G3DSA:2.60.40.3940
XHV15888.1
1 515
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Halomonas phage vB_HboP_4908
[NCBI] 		3350578 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHV15888.1 [NCBI]
Genbank nucleotide accession
PQ368759.1 [NCBI]
CDS location
range 13249 -> 14796
strand +
CDS
ATGGCGCTCAAAATCACTATCACAGATGCCGGGCGTGCTGAACTGATCAACGCCGACAATACCGGTACCGGCCCTGTCGAGATCACCCATGTAGCCTTTACTGCTACCGCCTTCGCCCCCAGCAAAACCCTTAACGCAGTGCCGGATGAGATCAAGCGGCTATCGAGTATCGCGGGGGAAGTCGTCGCGGACGATACGATCAGCGTGACCGCCAAGGACGAAGGAGCCGACGCTTACACCGTGCGCGGCTTTGGCCTGATCAGCGAATACGGCACCCTGTTTGCGGTTTATAGCCAGTCAGCGCCGATCATTGAAAAATCAGGGCCAACCACGCTACTGCTCACGACCGATATCATTCTGGCCGACCTGCCCACGGCGTCGCTGACCTTTGGTGATATCAGCTTTAGCAATCCGCCTGCCAGCCTCACAACGCCTGGCGTTACGCGCCTTAGCAATGCCACCGACAGCACCGCCCAGAACCTGGCCGCCACACCACGCGCTGTGAAGTTGGCTAACGACAATGCCAATACGCGACTAAGCAAAGCTGCCAACCTGGCGGATCTCACCAACGCAGCAACGGCGCGGGTGAATTTGGGCCTAGGCACATCGGCAACGCTTGGCAACACCGCGCTACGCACCTCAAGTAGCACCACGTTACTGCTGCAGGCGGCGGCGATGAATGACCACCGCCAAAGTGGTGATCACGATGATCGTTACGCTCAGCGCAGTAACAACCTAAGCGACCTACCCAGCGCCGCCCAGGCTCGTGGCAATTTGGGGCTATCTACCGCAGCCACGATGGGCACCACGGCAAGCCGTACCTCGACCAGCACATCCACCGTGCTACAAGCTAAAGGCATGAATGATCACCGACAGAGTGATGATCATGATGGTCGTTACTACCAGAAAAGTGAATTTACCGATGCGGACACTCCAGACTCGCCGATGCGCCGCAGCAGTGCGGGTGACGTTTGGGCTCGGCTATTTCGCAGTAGTTACTCGCCTACTAATAGCAACATCGCGGCTATTTATACCACTCAGACGATTGGTGGCGATTACATGCGGCCGTCTACACCGGCACAAGTCAAAGCGGCATTGACGTTAAATAAAAACGATGTGGGATTAAGCAATTTACCCAACAGCACGACTGCGTCGCGTACCAGTTCTTCCACCGCGTCGTTGTTACAGGCGAAAGCGATGAATGATCACCGTTTGAGTGGTGATCACGACAGTAGGTATGTAAGGCCTAGTGATTTCACTCGTTCACTAGGTCTAAATCAACATTGCGCACTGCCTGGCGGCTGGATTCATCAATCTGGGCAGGTCAGTCTTAACGCTCTGGCAGGTACAGCGCAAAGCCGAGTTATTAACTTACCCACATCATTTCCTAACGGCATGTCGGGCTTAGCATTCGCAATACTCTCTGATACACCACAAGACTTGCGAATTAGCTACGCCCCCATCAATAACGGATCATTCCGCATGTTCCTCTATTCGTCAGTTAACGTTAGCAACCAGATCTGCAAATATATTGCCACGGGGTGGTAA

Tertiary structure

PDB ID
585ec9c71d5665f96d0f4d196da8203f7bef1b616da0c466b3fb8ac04e1a9b68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified hadal zoon P2-like virus reveal genomic diversity and biogeographic distributions Liu,Y. 2023-10-17 — GenBank