Protein

View in Explore
Genbank accession
VUD37913.1 [GenBank]
Protein name
Phage tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MVNGDVIIKGILSLIGNELLIEKDNGFSGIHIRNKSTVAGSANGVDFSFGGAIMSSLICGIMENGANYIDVALSPAGNISDRRKVAFTLDGNIRQLIPQNGWSIQGYTKNSDFTQAMADAGWVRFPNGIIFQWCWGNTDASGWASAPFPVGWPVRCFGLLACNVAGDSIASAIAGVKRLNDRDMQVTLMERSGVAVSKPFFCIGVGC
Physico‐chemical
properties
protein length:207 AA
molecular weight: 22012,96800 Da
isoelectric point:6,54628
aromaticity:0,09179
hydropathy:0,20338

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
RBD
115–206
G3DSA:2.60.40.3940
G3DSA:2.60.40.3940
RBD
120–206
G3DSA:2.60.40.3940
IPR054075
RBD
124–204
IPR054075
VUD37913.1
1 207
Architecture
RBD
RBD 115-206 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VUD37913.1
1 207
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4833
Central domain 11 196 187 0,0679
C-terminal 197 207 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-196
C-terminal
197-207

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia virus Mu_3F6
[NCBI] 		2686059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VUD37913.1 [NCBI]
Genbank nucleotide accession
LR595867.1 [NCBI]
CDS location
range 34274 -> 34897
strand -
CDS
GTGGTTAACGGTGATGTGATTATCAAGGGCATTCTCTCGTTAATTGGGAATGAATTACTTATTGAAAAAGATAATGGCTTTTCTGGTATTCACATCAGAAACAAGAGCACGGTTGCAGGAAGTGCAAATGGAGTCGATTTCTCATTTGGCGGAGCGATTATGTCATCGCTCATTTGCGGAATAATGGAAAATGGCGCGAACTACATAGATGTTGCATTGTCTCCGGCAGGCAATATTTCTGACCGCCGCAAGGTTGCATTTACTTTGGATGGAAATATCAGGCAGTTAATTCCCCAGAATGGATGGAGCATTCAGGGGTATACAAAAAACAGTGATTTTACCCAGGCGATGGCCGATGCTGGCTGGGTACGTTTTCCAAATGGCATCATTTTTCAATGGTGTTGGGGAAATACTGATGCCAGTGGCTGGGCATCTGCCCCGTTTCCTGTTGGTTGGCCTGTTCGTTGCTTTGGTTTGTTAGCCTGTAACGTTGCTGGTGACTCGATAGCAAGTGCAATTGCGGGTGTTAAAAGATTAAATGATCGCGATATGCAGGTCACGTTAATGGAAAGGTCTGGGGTTGCTGTTTCTAAACCATTCTTCTGTATTGGTGTGGGGTGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff8d7fad5980ee4b7f39816415ee9db53171193876892cbf00fe33ce8479c4de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7558
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50