Protein

View in Explore
Genbank accession
AZU98473.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFTRILSYGNEVKAPTILGERVQVNYSAAWYLHRNGDLYAIGQNNLGQLGTGDTTNLSSWTKVLTRVKRYFGGVHGTLAIDEDNIMWYTGSTYGMPIAQNTRSFVNVTKYFSDFGVSPDDIKSVYIAEGIRVLLNNGKWFFYGSNSAGCFGTGSSASVTKFTYSSIENVQYMSCGFNTTCLILSDGSCYYAGTMMLSGTTPTSVPTFTKTLDDVLYTANTFYTTYYFMKDGSIRTASINTQGQGSVGNTNPVLNSVQIRTQFDPSVPLRVIGSLSNSAGMSPMIWINNQIWRCGFNIYGQCGNGAASSAQATLTPMIFGTVSNIVSFGGDNLFSMVIDNNDDMFVCGNTPINGISFYNRLTRLADEKMPWK
Physico‐chemical
properties
protein length:373 AA
molecular weight: 40872,64680 Da
isoelectric point:7,49817
aromaticity:0,12601
hydropathy:-0,08177

Domains

Domains [InterPro]
DC_0433
ATT
1–133
DC_0433 IPR009091
IPR009091
STR
18–197
IPR009091 IPR009091
IPR009091
STR
26–93
IPR009091
IPR051553
Unmapped
33–269
IPR051553
IPR000408
STR
38–85
IPR000408
AZU98473.1
1 373
Architecture
ATT
STR
ATT 1-133 | STR 134-356 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU98473.1
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,1088
Central domain 58 330 274 0,6313
C-terminal 331 373 42 0,2486
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-330
C-terminal
331-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Munch
[NCBI] 		2500169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU98473.1 [NCBI]
Genbank nucleotide accession
MK268344 [NCBI]
CDS location
range 338219 -> 339340
strand -
CDS
ATGATACCATTTACAAGAATATTAAGTTATGGCAATGAAGTTAAAGCACCGACTATATTGGGTGAACGAGTTCAGGTAAATTACAGTGCAGCATGGTATTTACACCGTAATGGTGATCTATATGCAATTGGACAGAATAACTTGGGTCAATTAGGAACTGGTGATACAACGAACCTATCATCGTGGACTAAGGTATTAACCAGAGTGAAAAGATATTTCGGTGGTGTACATGGAACACTGGCTATAGATGAAGATAATATAATGTGGTACACTGGAAGTACATATGGTATGCCAATAGCACAAAATACAAGATCCTTTGTTAATGTAACGAAGTACTTTTCAGATTTTGGGGTATCGCCAGATGATATAAAAAGTGTTTACATTGCTGAAGGTATTAGAGTATTATTGAATAATGGAAAATGGTTCTTTTATGGAAGCAATAGTGCGGGGTGTTTCGGTACTGGTAGTTCTGCTAGTGTTACTAAATTCACATATAGTTCAATCGAAAACGTTCAGTACATGTCCTGTGGATTTAATACAACCTGTTTAATATTAAGTGATGGAAGCTGTTATTATGCAGGAACGATGATGTTATCTGGTACTACGCCAACCTCAGTACCTACATTTACAAAAACATTGGATGATGTATTGTACACTGCTAATACATTTTATACAACATATTATTTTATGAAAGATGGTTCTATACGAACTGCATCAATTAACACGCAAGGTCAAGGTTCTGTTGGTAATACGAATCCAGTACTTAATTCAGTACAGATCCGTACTCAATTTGATCCTTCTGTACCATTAAGAGTAATTGGTTCTTTATCAAATAGTGCGGGTATGTCACCGATGATATGGATTAACAATCAAATATGGCGTTGTGGATTTAATATATATGGACAATGTGGTAATGGTGCAGCTTCGTCAGCACAAGCTACACTTACACCAATGATATTTGGTACAGTATCTAATATTGTATCCTTTGGTGGTGATAATTTATTTTCAATGGTTATTGATAATAACGATGATATGTTTGTATGTGGTAATACACCAATAAATGGAATTTCATTTTACAATAGGCTTACTCGACTTGCCGATGAAAAAATGCCTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36ee25041d1acae63891bab5b321abbf328e72a50840c4ffaf6f89a6d3c87a94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella myophage Munch Crosby,S.T., O'Leary,C.J., Xie,Y., Gill,J. and Liu,M. 1988 — GenBank