Protein

View in Explore
Genbank accession
ALF02475.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNITPNIVVSQPSQLFTLARSFKANANGKIYIGKIDTDPVNQENQIPVYLEREDGTHVQVAQPIVINSAGYPVYNGQIAKFVTVQGHSMAVYDRCGVQQFYFPNVLKYDPDQFEKRLSGNDGFKFIGRVPDIDTLRTIHGKDGDAVILEAYRVGDGLGESVVYWDATSTKNDNGGTVFAVSGVATGRWIRKYKTLEAKMFGLPKEGDCYDEMAAIEAIMFEEGVDCIFYDGIYAITGSRNMPWRGSDLNNFKSYKGASIRCIGNVVFSTKSPDGADVFQMNCVSDLNIIGFPVLKGTLTRGDSSGTNGVSITNGGKNIFIEVEADSLPFTVTSSGLDGGKAVTIQNGPSAVLPYQNIKINCRRAHNCPYGFEMSIVGDSLINNPNSGIEVDIYAENCYRGVAIGSSENTKEIPTNGLNHGVKVRAILKDCQQDIVVIRDWGLDIEATVIQTKDPFMYNPHDSKREVLESAGSKYSRIKISGIKLAVDSLYTIGGIHYSPSVSGRTGQAEWCVYDLNVTTQVATTTLTVMDSGGVTAKNNTLRSSTLSAVDVIAFISNGNTVTIGVP
Physico‐chemical
properties
protein length:567 AA
molecular weight: 61504,66440 Da
isoelectric point:5,43986
aromaticity:0,08642
hydropathy:-0,16596

Domains

Domains [InterPro]
IPR009093
1–113
IPR009093
IPR036730
2–111
IPR036730
IPR036730
7–109
IPR036730
ALF02475.1
1 567
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SEN22
[NCBI] 		1647458 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. diarizonae
[NCBI] 		59204 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALF02475.1 [NCBI]
Genbank nucleotide accession
KT630648.2 [NCBI]
CDS location
range 18550 -> 20253
strand +
CDS
ATGACTAACATCACGCCAAATATTGTTGTATCACAACCAAGCCAGTTATTTACTTTAGCGCGTTCTTTTAAAGCAAATGCTAATGGCAAAATCTATATTGGTAAGATTGACACTGACCCGGTAAACCAAGAAAACCAGATCCCTGTATATCTGGAACGAGAAGATGGTACTCATGTTCAGGTGGCACAGCCAATTGTTATCAATTCTGCAGGCTATCCGGTATACAACGGACAGATTGCAAAGTTCGTGACTGTGCAGGGACACAGCATGGCTGTGTATGATAGGTGTGGGGTGCAACAGTTCTATTTCCCGAATGTACTGAAGTATGATCCAGACCAATTTGAGAAGAGACTGAGCGGGAATGATGGATTTAAATTCATTGGTCGAGTTCCTGATATTGATACTCTGCGTACTATTCATGGTAAAGATGGTGATGCTGTTATTCTGGAAGCGTACCGGGTGGGTGATGGTCTTGGCGAGAGCGTCGTTTATTGGGATGCTACATCAACTAAAAATGACAATGGCGGAACAGTATTTGCGGTATCTGGTGTTGCAACTGGAAGATGGATTCGTAAGTATAAAACTCTAGAAGCAAAAATGTTTGGTCTTCCAAAAGAAGGGGACTGTTACGACGAGATGGCGGCTATCGAGGCCATTATGTTTGAGGAAGGCGTGGATTGTATTTTCTATGACGGAATCTATGCGATTACTGGATCCAGAAATATGCCGTGGCGCGGTAGCGACCTGAATAATTTCAAATCGTACAAGGGGGCCAGCATTCGCTGCATTGGTAATGTAGTTTTTTCAACAAAATCTCCTGATGGTGCTGATGTATTCCAGATGAACTGTGTTTCCGATTTAAATATTATCGGATTCCCAGTTCTTAAGGGTACGCTCACTAGAGGTGATTCCTCCGGAACAAATGGCGTATCAATAACCAACGGAGGGAAAAATATATTCATTGAGGTTGAGGCTGATTCATTACCTTTCACCGTGACAAGTTCAGGACTAGATGGTGGAAAAGCTGTAACTATACAGAACGGGCCTTCAGCGGTACTCCCTTATCAAAATATAAAAATTAATTGTCGGAGAGCGCACAACTGCCCATATGGCTTTGAGATGTCGATAGTAGGAGATTCACTGATAAATAATCCAAATTCTGGCATAGAGGTAGATATTTATGCTGAGAACTGTTACAGAGGCGTTGCAATCGGCTCTAGCGAGAACACCAAAGAGATACCGACAAATGGATTAAACCATGGTGTAAAAGTTAGAGCTATTCTTAAAGATTGTCAGCAGGATATCGTTGTTATAAGGGATTGGGGTTTAGACATTGAGGCGACGGTAATCCAGACTAAAGACCCTTTTATGTACAATCCACATGACTCAAAAAGGGAAGTTTTGGAGTCTGCTGGCTCTAAGTACTCACGCATAAAAATATCCGGAATAAAATTGGCTGTCGATTCACTGTATACAATAGGGGGGATTCATTATAGCCCATCCGTCAGTGGGAGAACCGGTCAAGCCGAGTGGTGCGTATATGACCTTAATGTTACGACGCAAGTCGCTACAACAACACTTACTGTCATGGATTCAGGTGGTGTTACCGCAAAAAATAACACGCTCAGGTCATCTACACTATCAGCAGTAGATGTGATTGCATTCATATCCAATGGTAATACCGTAACTATAGGCGTTCCGTGA

Tertiary structure

PDB ID
69e61c8e1eb5d6ad72081b09ba4f9891aad5b19b975d0c7680cc95dde7f63d19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages of Salmonella enterica subsp. salamae and subsp. diarizonae: novel phages with a mosaic genome structure and activity against pathogenic S. enterica subsp. enterica isolates Pastekova,L., Bosak,J., Dedicova,D., Benada,O., Smarda,J. and Smajs,D. — — GenBank