Protein

View in Explore
Genbank accession
QGZ14111.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MVNVTPISPIVPGDTSVGDSVAKANDVFSRILEQGQSVNGLLIDVGDKTSLQTSVKTSLVAAINEILARFNNGFLVESITGLLANLATTNKTNLVSAINEVVGEIGDLDSLQSVDKTSIVAAINEILTENAGVGNLQNLSTIDKSNIVSAINELSLSIGSFTNLSGYQDIVSAINEISDDLGDRDELETTVKNNLVVAINEIVSKYELFVAKDGSTAFTGNVNLDNHKVINLAPGTNPNDAVTVAQIPELVKLGDVDSLSTSTKENAVLAINEVVGYIGQLNLLNTTVKTNIVASINEIVANIDYQAMQTKLSGETLIKFGSTVNSDHDQIFDFRSSAVTGPTSYDLRIVRESGSNGETRIIQNGSGQTFISTNDEINGVIDRVRVNADVVNPFEIYKDGVWVAVATGGASLPLVGGIMTGPIQFDKEPSSNNILIDLQQGYGIYSDEVGTYDSSISRLWIDGPAVGEIHIGPKVTGNLRGIELRTDRLDVTGEIFSSSDITLLSDERVKTEIETIDDGLEKVYGMRGVHYIKDGKFSTGVIAQELEKIAPELVKDAGELKAVNYPQLTAYLIEAVKDLVDQVNDLNRRIIVLENNQ
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63959,92480 Da
isoelectric point:4,38089
aromaticity:0,04858
hydropathy:-0,01658

Domains

Domains [InterPro]
DC_1369
ATT
1–77
DC_1369 DC_1369 DC_0811 IPR051577
DC_0811
STR
68–133
DC_0811 DC_0811 DC_0203
IPR030392
CHP
505–555
IPR030392 Coil
IPR030392
CHP
505–590
IPR030392
QGZ14111.1
1 597
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-77 | STR 78-126 | ATT 127-168 | STR 169-432 | RBD 490-597
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RL2RES
[NCBI] 		103371 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus RL2RES >
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ14111.1 [NCBI]
Genbank nucleotide accession
MN549361.1 [NCBI]
CDS location
range 131504 -> 133297
strand -
CDS
ATGGTTAACGTAACTCCAATTTCGCCTATTGTTCCAGGTGACACTTCCGTCGGTGATTCCGTCGCGAAAGCGAACGACGTCTTCAGCAGAATTCTGGAACAAGGACAGTCAGTCAACGGTCTTCTGATTGATGTCGGTGACAAGACTTCGCTCCAGACCAGTGTCAAGACGAGCCTCGTGGCTGCGATCAACGAAATCCTGGCTCGCTTCAACAACGGCTTCCTCGTCGAGAGCATCACTGGTCTTCTCGCCAACCTCGCCACGACGAACAAGACGAACCTTGTTTCTGCGATCAACGAGGTCGTCGGTGAGATTGGTGATCTGGACAGTCTCCAGTCTGTCGATAAGACGAGCATCGTGGCAGCGATCAACGAGATTTTGACCGAGAATGCTGGTGTCGGCAATCTTCAGAACCTCTCGACTATCGACAAGTCGAACATCGTTTCTGCGATCAACGAGCTGTCTCTGAGCATCGGATCGTTTACGAACTTGTCCGGCTACCAGGATATCGTGTCTGCAATCAACGAGATTTCTGACGACCTCGGAGATCGTGACGAGTTGGAAACGACTGTCAAGAACAACCTGGTCGTAGCTATCAACGAGATCGTTTCGAAGTACGAACTGTTCGTGGCGAAAGACGGATCGACTGCATTCACAGGCAATGTGAACCTCGACAACCACAAGGTGATCAATCTTGCTCCTGGTACGAACCCGAACGACGCTGTCACTGTAGCTCAGATCCCTGAACTCGTGAAGCTCGGTGACGTAGACAGCCTCTCGACATCTACGAAGGAGAATGCTGTCCTCGCTATCAACGAAGTTGTCGGCTACATCGGTCAACTCAATCTTCTGAACACGACCGTGAAGACGAACATCGTTGCTTCAATCAACGAGATCGTCGCCAACATCGACTACCAAGCCATGCAGACTAAGTTGTCTGGAGAGACTCTGATCAAGTTCGGTTCGACTGTCAACAGCGATCACGATCAGATCTTCGACTTCAGATCTTCTGCTGTCACAGGTCCTACGAGCTACGATCTGCGTATCGTTCGTGAGAGTGGTTCGAACGGTGAGACTCGCATCATTCAGAACGGCAGCGGTCAGACATTCATCTCGACCAATGACGAAATCAACGGTGTCATCGATCGTGTCCGTGTCAACGCTGATGTTGTCAATCCGTTCGAAATCTACAAGGATGGTGTCTGGGTTGCAGTCGCTACCGGCGGTGCTTCGCTTCCTCTCGTAGGCGGCATCATGACCGGTCCGATCCAGTTCGACAAAGAACCGAGTTCGAACAACATTCTGATCGATCTCCAACAGGGTTACGGTATCTATTCAGACGAAGTCGGCACCTACGACAGTTCGATCAGTCGCTTGTGGATCGACGGTCCAGCAGTCGGAGAAATCCATATCGGACCTAAGGTCACTGGCAATCTTCGTGGTATCGAACTTCGAACCGATCGACTCGATGTCACCGGTGAGATCTTCTCGTCCAGCGACATCACGTTGCTCTCTGACGAACGAGTGAAGACTGAGATCGAAACGATCGACGACGGACTCGAAAAAGTCTACGGCATGCGCGGTGTCCACTACATCAAGGACGGCAAGTTCTCCACTGGTGTCATCGCTCAGGAACTCGAGAAGATCGCTCCTGAACTCGTCAAGGATGCTGGCGAACTCAAGGCTGTGAACTATCCGCAGCTCACTGCTTACCTCATCGAGGCTGTGAAAGATCTCGTCGATCAAGTGAACGATCTCAACCGTCGTATCATCGTGTTGGAGAACAATCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bea964aa51f58c6b0e467c7f0eb7b6b89e24ef6c2d6e45fef965b1f9fcf799a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_RLeM_RL2RES Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2022-09-15 — GenBank