Protein

View in Explore
Genbank accession
ATS93750.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MSSNTDIIALLSSDADKAVDQIIEDSKRLHIVVNGTGTEQAVAEDGSLLPSVRKALIDNLYFKTPPLPWRNGGSVNEFNQLYSFTDVSGNTTWWYAPGATVSNPVVMRDSPINDGKFKVFLDKTNIADIYAPLNSPNFVGNPRVPTPAPGDNSQSIPTTGWVQSEMQDLEDLIISSMRGEFENITVRNDAILQDTYINGEFVVTSDKLAAANAEATFRRIRMVGTGTTGTAATEIAFEQNTTPPPGVSTKTNIKPFAVSTGILTVDQINGKAAQVGDVAVSTDSLNVDGYMRGDYLHLEGNNRNTADRPQLIVDGIAEIETLRVTGTIEGVKADVDGLDIHPRSVTVDEGLTVAKDTTMTGKLTVGGTTKVGNLEVTGTLSGVVISVDGKDIKPRSVNTGNLVATGDVQISGTTTATGKITTQDLEVLGTLTANLDLSGSDLSVDNINVAQTATITDLVVTGTTTGVKGDVEGEAIAPASVAATGTVSAASMSTTGNMAVGGNLTITGDFRPASVAGQDTPRLVVQGDSDLQGDLNVGEDLRVEGDTNLFGNLSVTGTITGNMNFSGKTIAPATVNATTVTATNLTVTGTIDLPDSPIVAQEITATNVEATGKMVAGKYSTTPKTANATTATFTPDGTTSIYNVNVQADTEVQAPAGLLSSGKGESIFIYFEQDTTGHAVTFSSAFVVHNAATVSNAANSITIANLVYRGTGPLIDVFLTGR
Physico‐chemical
properties
protein length:722 AA
molecular weight: 75130,65110 Da
isoelectric point:4,42033
aromaticity:0,04848
hydropathy:-0,07576

Domains

Domains [InterPro]
DC_0062
STR
2–429
DC_0062 IPR058970
IPR058969
ATT
14–120
IPR058969 DC_0092
ATS93750.1
1 722
Architecture
STR
ATT
STR
STR 2-13 | ATT 14-120 | STR 121-722
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_IV
[NCBI] 		2041491 No lineage information
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93750.1 [NCBI]
Genbank nucleotide accession
MF979563.1 [NCBI]
CDS location
range 28908 -> 31076
strand +
CDS
GTGTCATCCAATACCGATATCATTGCCCTGTTGAGCAGCGATGCCGACAAGGCAGTTGACCAGATTATTGAGGACTCCAAACGTCTTCACATCGTGGTCAACGGGACGGGCACCGAGCAGGCCGTCGCAGAGGATGGGAGCTTGCTCCCGTCTGTTCGCAAAGCACTGATCGATAACCTGTACTTCAAAACTCCCCCACTGCCTTGGCGTAATGGCGGGTCTGTCAACGAGTTCAACCAGCTTTACTCCTTCACGGATGTGAGCGGAAACACCACGTGGTGGTATGCGCCGGGCGCTACAGTTTCAAATCCGGTTGTCATGCGTGACAGCCCGATCAATGACGGTAAGTTCAAGGTGTTCTTGGACAAGACCAACATTGCAGACATCTACGCACCGCTGAACTCCCCTAACTTCGTTGGCAACCCTCGTGTTCCGACGCCTGCGCCGGGAGACAACAGCCAGTCCATCCCAACTACGGGGTGGGTTCAGTCAGAGATGCAGGATCTTGAAGACCTGATCATCTCCTCCATGAGGGGTGAGTTCGAGAACATCACTGTCCGTAATGACGCGATTCTTCAGGACACGTACATCAACGGCGAGTTCGTCGTTACCAGCGACAAGCTGGCAGCAGCGAACGCCGAGGCCACCTTCCGCCGTATTCGTATGGTCGGGACCGGGACTACTGGGACAGCGGCTACGGAAATTGCTTTCGAGCAGAACACCACCCCTCCTCCGGGAGTTAGCACAAAGACTAACATTAAACCGTTCGCCGTGTCAACTGGTATTCTGACGGTTGACCAGATCAATGGTAAAGCCGCCCAGGTCGGTGATGTGGCTGTGTCTACTGACTCCCTGAATGTGGATGGCTACATGCGTGGGGACTATCTCCACCTGGAGGGGAACAACCGAAACACTGCGGATCGTCCACAACTGATCGTCGATGGTATCGCAGAGATCGAAACCCTGCGTGTGACCGGGACCATCGAAGGGGTAAAAGCCGACGTTGACGGACTTGACATCCACCCACGTAGTGTTACAGTGGATGAGGGTCTGACTGTTGCAAAAGACACCACTATGACCGGGAAACTGACAGTTGGTGGAACCACCAAGGTCGGCAACCTCGAAGTGACAGGCACTCTGTCTGGTGTGGTAATCAGTGTTGATGGTAAGGACATTAAGCCGCGCTCTGTGAACACAGGTAATCTGGTTGCGACGGGTGATGTGCAGATCAGCGGCACCACTACTGCAACAGGCAAGATCACCACTCAAGACCTCGAAGTTCTGGGAACCCTGACGGCAAATTTGGACCTGTCTGGTTCAGACCTGAGTGTTGATAACATCAATGTGGCCCAGACGGCAACGATCACGGATCTCGTCGTGACCGGAACAACCACGGGTGTTAAGGGTGATGTTGAGGGTGAGGCAATTGCACCTGCAAGCGTCGCAGCAACCGGGACTGTCTCTGCTGCTTCCATGTCCACCACAGGAAACATGGCGGTTGGTGGTAACCTGACCATAACGGGTGACTTCCGCCCGGCGAGCGTTGCTGGTCAAGATACACCTCGCTTGGTTGTTCAAGGTGACTCTGATCTCCAAGGAGACCTGAATGTTGGTGAAGACCTTCGTGTAGAGGGCGACACAAACCTGTTTGGTAACTTGTCTGTGACAGGAACCATTACAGGAAACATGAACTTCTCAGGTAAAACAATCGCCCCGGCGACTGTTAACGCGACTACGGTCACGGCTACCAACCTGACAGTCACTGGAACCATTGATCTGCCCGATAGCCCTATCGTGGCTCAAGAAATTACCGCGACAAACGTCGAAGCAACTGGTAAAATGGTTGCAGGTAAGTATTCTACCACACCGAAGACTGCCAATGCAACAACGGCGACGTTTACTCCAGATGGGACTACAAGCATCTACAACGTCAACGTGCAGGCAGACACAGAGGTTCAGGCCCCTGCTGGGTTGCTGTCTTCAGGTAAAGGAGAGTCAATCTTCATTTACTTCGAGCAAGATACGACTGGACATGCGGTAACGTTCAGCAGTGCGTTCGTTGTTCACAACGCTGCGACTGTCAGCAACGCTGCAAACTCCATTACGATCGCTAACCTCGTGTATCGTGGAACTGGCCCGCTGATCGATGTGTTCTTGACCGGACGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81a0197c5473106f70c453549dd66f330988885a04e71c20645299f9cd12656a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_IV) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank