Protein

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Genbank accession
ATS93750.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSNTDIIALLSSDADKAVDQIIEDSKRLHIVVNGTGTEQAVAEDGSLLPSVRKALIDNLYFKTPPLPWRNGGSVNEFNQLYSFTDVSGNTTWWYAPGATVSNPVVMRDSPINDGKFKVFLDKTNIADIYAPLNSPNFVGNPRVPTPAPGDNSQSIPTTGWVQSEMQDLEDLIISSMRGEFENITVRNDAILQDTYINGEFVVTSDKLAAANAEATFRRIRMVGTGTTGTAATEIAFEQNTTPPPGVSTKTNIKPFAVSTGILTVDQINGKAAQVGDVAVSTDSLNVDGYMRGDYLHLEGNNRNTADRPQLIVDGIAEIETLRVTGTIEGVKADVDGLDIHPRSVTVDEGLTVAKDTTMTGKLTVGGTTKVGNLEVTGTLSGVVISVDGKDIKPRSVNTGNLVATGDVQISGTTTATGKITTQDLEVLGTLTANLDLSGSDLSVDNINVAQTATITDLVVTGTTTGVKGDVEGEAIAPASVAATGTVSAASMSTTGNMAVGGNLTITGDFRPASVAGQDTPRLVVQGDSDLQGDLNVGEDLRVEGDTNLFGNLSVTGTITGNMNFSGKTIAPATVNATTVTATNLTVTGTIDLPDSPIVAQEITATNVEATGKMVAGKYSTTPKTANATTATFTPDGTTSIYNVNVQADTEVQAPAGLLSSGKGESIFIYFEQDTTGHAVTFSSAFVVHNAATVSNAANSITIANLVYRGTGPLIDVFLTGR
Physico‐chemical
properties
protein length:722 AA
molecular weight: 75130,65110 Da
isoelectric point:4,42033
aromaticity:0,04848
hydropathy:-0,07576

Domains

Domains [InterPro]
IPR058969
14–120
IPR058969 IPR058970
ATS93750.1
1 722
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_IV
[NCBI] 		2041491 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93750.1 [NCBI]
Genbank nucleotide accession
MF979563 [NCBI]
CDS location
range 28908 -> 31076
strand +
CDS
GTGTCATCCAATACCGATATCATTGCCCTGTTGAGCAGCGATGCCGACAAGGCAGTTGACCAGATTATTGAGGACTCCAAACGTCTTCACATCGTGGTCAACGGGACGGGCACCGAGCAGGCCGTCGCAGAGGATGGGAGCTTGCTCCCGTCTGTTCGCAAAGCACTGATCGATAACCTGTACTTCAAAACTCCCCCACTGCCTTGGCGTAATGGCGGGTCTGTCAACGAGTTCAACCAGCTTTACTCCTTCACGGATGTGAGCGGAAACACCACGTGGTGGTATGCGCCGGGCGCTACAGTTTCAAATCCGGTTGTCATGCGTGACAGCCCGATCAATGACGGTAAGTTCAAGGTGTTCTTGGACAAGACCAACATTGCAGACATCTACGCACCGCTGAACTCCCCTAACTTCGTTGGCAACCCTCGTGTTCCGACGCCTGCGCCGGGAGACAACAGCCAGTCCATCCCAACTACGGGGTGGGTTCAGTCAGAGATGCAGGATCTTGAAGACCTGATCATCTCCTCCATGAGGGGTGAGTTCGAGAACATCACTGTCCGTAATGACGCGATTCTTCAGGACACGTACATCAACGGCGAGTTCGTCGTTACCAGCGACAAGCTGGCAGCAGCGAACGCCGAGGCCACCTTCCGCCGTATTCGTATGGTCGGGACCGGGACTACTGGGACAGCGGCTACGGAAATTGCTTTCGAGCAGAACACCACCCCTCCTCCGGGAGTTAGCACAAAGACTAACATTAAACCGTTCGCCGTGTCAACTGGTATTCTGACGGTTGACCAGATCAATGGTAAAGCCGCCCAGGTCGGTGATGTGGCTGTGTCTACTGACTCCCTGAATGTGGATGGCTACATGCGTGGGGACTATCTCCACCTGGAGGGGAACAACCGAAACACTGCGGATCGTCCACAACTGATCGTCGATGGTATCGCAGAGATCGAAACCCTGCGTGTGACCGGGACCATCGAAGGGGTAAAAGCCGACGTTGACGGACTTGACATCCACCCACGTAGTGTTACAGTGGATGAGGGTCTGACTGTTGCAAAAGACACCACTATGACCGGGAAACTGACAGTTGGTGGAACCACCAAGGTCGGCAACCTCGAAGTGACAGGCACTCTGTCTGGTGTGGTAATCAGTGTTGATGGTAAGGACATTAAGCCGCGCTCTGTGAACACAGGTAATCTGGTTGCGACGGGTGATGTGCAGATCAGCGGCACCACTACTGCAACAGGCAAGATCACCACTCAAGACCTCGAAGTTCTGGGAACCCTGACGGCAAATTTGGACCTGTCTGGTTCAGACCTGAGTGTTGATAACATCAATGTGGCCCAGACGGCAACGATCACGGATCTCGTCGTGACCGGAACAACCACGGGTGTTAAGGGTGATGTTGAGGGTGAGGCAATTGCACCTGCAAGCGTCGCAGCAACCGGGACTGTCTCTGCTGCTTCCATGTCCACCACAGGAAACATGGCGGTTGGTGGTAACCTGACCATAACGGGTGACTTCCGCCCGGCGAGCGTTGCTGGTCAAGATACACCTCGCTTGGTTGTTCAAGGTGACTCTGATCTCCAAGGAGACCTGAATGTTGGTGAAGACCTTCGTGTAGAGGGCGACACAAACCTGTTTGGTAACTTGTCTGTGACAGGAACCATTACAGGAAACATGAACTTCTCAGGTAAAACAATCGCCCCGGCGACTGTTAACGCGACTACGGTCACGGCTACCAACCTGACAGTCACTGGAACCATTGATCTGCCCGATAGCCCTATCGTGGCTCAAGAAATTACCGCGACAAACGTCGAAGCAACTGGTAAAATGGTTGCAGGTAAGTATTCTACCACACCGAAGACTGCCAATGCAACAACGGCGACGTTTACTCCAGATGGGACTACAAGCATCTACAACGTCAACGTGCAGGCAGACACAGAGGTTCAGGCCCCTGCTGGGTTGCTGTCTTCAGGTAAAGGAGAGTCAATCTTCATTTACTTCGAGCAAGATACGACTGGACATGCGGTAACGTTCAGCAGTGCGTTCGTTGTTCACAACGCTGCGACTGTCAGCAACGCTGCAAACTCCATTACGATCGCTAACCTCGTGTATCGTGGAACTGGCCCGCTGATCGATGTGTTCTTGACCGGACGCTAA

Tertiary structure

PDB ID
81a0197c5473106f70c453549dd66f330988885a04e71c20645299f9cd12656a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_IV) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank