Protein

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Genbank accession
AIM40726.1 [GenBank]
Protein name
putative tail fiber adhesion protein
RBP type
TF
Evidence RBPdetect
Probability 0,63
TF
Evidence Phold
Probability 1,00
Protein sequence
MAINSFDREPITIVEIDMDYCALTFGNAPCTATGSGNSKCFNTFRTCQDQQNFTDETFTYRFCTNVSPLPTNLEAFPFLTSATTAPAEIDLRGGLGTRANASLSFIDPPSTDIGIDKYLDERSYIATERGSFWTKWRARNPFYVGRPCRVIKAFIVDGEVDYANAVTRHYVLENVNAGGGRCSITAKDTLKLASNNRAKAPVSSRGELLADLTASDTEAELQPTGVGSEYPSEGFIRVRSEVMGFTRSGDTLTLTRGEYNTLPTEHSAGDTAQLCLEYTGELLHTVIEDLLTTYAGVNPAFIPLAEWADEVTSFVPGGLSTLITEPTGVQDLLKELGEQYPHSLYWDERDQLIRLRAVQPPPINAPTYNMDSHLLEGQTSVRDKPDLRISTVIIYFGQFDPTQKLDETRNYSQAYIREDSDSVVQYGSREIKTIYSRWITNLNKAQAVRACARLGRRFADIPRELSWKFDDKDSDLWAGDVARINFRDVTDFTGSALSTDYQVVSVQEQDGYVYSGIEYTYGPQLPEDDFEEELTIRVGADANNLDMRDVFDSVFPSIDPADSTVRFIIEGNAVVGSELTTSPSIRTGEWPSTTDLILDNRGITAGAGGRGSNATTSNAEDGGLALLLENDLTLINLGIIGGGGGGGGRGQASAGGGNAFAGGGGGAGRNAGAAGSGTSYDDGAGQLISLVNPSSGGVTTGGGGGTVQFESGSEAIVASGGSGGDLGQAGGAGDASAGGAAGAAIDRNGFTLDEQTTGDIRGDIV
Physico‐chemical
properties
protein length:765 AA
molecular weight: 81438,63280 Da
isoelectric point:4,43648
aromaticity:0,08235
hydropathy:-0,30680

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Idiomarinaceae phage 1N2-2
[NCBI] 		1536592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Idiomarinaceae bacterium N2-2
[NCBI] 		1510939 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Idiomarinaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM40726.1 [NCBI]
Genbank nucleotide accession
KJ847052 [NCBI]
CDS location
range 15527 -> 17824
strand +
CDS
ATGGCGATTAATAGCTTTGACCGTGAACCTATTACTATTGTCGAGATAGACATGGATTACTGCGCGCTGACGTTCGGCAATGCGCCATGTACGGCTACGGGCTCAGGTAACAGCAAGTGCTTTAACACTTTTCGCACTTGCCAAGACCAACAGAATTTTACTGACGAAACCTTTACATATCGGTTTTGCACCAATGTATCGCCTCTGCCAACTAATCTCGAAGCGTTCCCGTTTTTAACATCGGCAACCACGGCGCCCGCAGAGATTGACTTGCGCGGCGGATTGGGCACGCGCGCTAATGCGAGCCTGTCATTCATCGACCCGCCATCAACTGACATAGGCATCGACAAGTACCTAGACGAGCGAAGCTACATTGCCACCGAGCGCGGCAGTTTTTGGACAAAGTGGCGAGCGCGCAACCCGTTCTATGTGGGTCGGCCTTGCCGTGTGATTAAGGCGTTCATTGTTGACGGTGAAGTGGACTACGCGAATGCAGTTACTCGCCACTATGTGCTGGAAAACGTAAACGCAGGCGGCGGGCGTTGTTCCATCACCGCCAAAGACACGCTAAAACTAGCCAGTAATAACCGCGCTAAAGCGCCTGTATCAAGCCGCGGCGAGCTTTTGGCGGACTTGACTGCTAGCGACACCGAAGCCGAGTTGCAGCCCACTGGCGTGGGCTCTGAGTACCCTAGTGAGGGCTTTATTCGCGTTCGCTCCGAGGTCATGGGCTTTACGCGCTCAGGTGATACGTTGACGCTGACGCGCGGTGAGTATAACACGCTACCTACTGAGCATAGCGCAGGTGATACGGCGCAGCTTTGCCTTGAATACACAGGTGAGCTATTGCACACGGTGATTGAAGATTTACTCACGACCTACGCAGGCGTTAATCCCGCGTTCATTCCGCTTGCTGAATGGGCTGATGAAGTGACCAGTTTTGTGCCTGGAGGACTGTCAACGCTTATCACCGAGCCAACAGGTGTGCAGGACTTACTGAAAGAGCTAGGCGAGCAGTACCCGCACAGCCTGTATTGGGATGAGCGAGACCAACTTATCCGGTTGCGTGCAGTGCAGCCGCCACCGATTAACGCACCGACGTACAACATGGATTCGCACTTGCTCGAAGGGCAAACCAGCGTACGCGATAAGCCCGACCTTCGCATCAGCACGGTGATTATCTACTTCGGACAGTTTGACCCGACGCAGAAGCTGGACGAGACGCGCAACTACTCGCAAGCCTACATACGCGAGGACAGCGACAGCGTAGTGCAGTACGGTAGCCGAGAGATAAAGACCATCTACAGCCGATGGATTACCAACCTAAACAAGGCTCAAGCGGTTCGTGCGTGTGCGCGGCTAGGGCGCAGGTTCGCGGACATACCGCGCGAGCTTAGCTGGAAATTTGACGATAAAGACAGCGATTTGTGGGCGGGCGATGTGGCGCGCATTAACTTTCGTGACGTGACCGACTTCACAGGCTCGGCACTATCCACTGATTACCAAGTGGTGAGCGTTCAGGAGCAGGACGGTTATGTGTACTCGGGCATTGAATACACCTATGGACCACAGCTACCAGAAGATGACTTTGAAGAAGAATTGACCATCCGTGTGGGCGCCGATGCGAACAATTTGGATATGCGAGACGTGTTCGACAGCGTGTTTCCTAGCATCGACCCCGCCGACAGCACGGTGCGCTTTATCATCGAGGGCAACGCCGTGGTAGGTAGCGAGCTTACCACATCACCATCCATCCGCACAGGTGAATGGCCAAGCACAACTGATTTAATACTGGACAACCGTGGCATCACGGCGGGTGCAGGTGGTCGAGGCTCGAACGCAACTACAAGCAACGCCGAGGATGGCGGGCTTGCGCTACTGCTTGAGAACGACCTGACGCTAATCAACCTAGGCATCATCGGTGGCGGCGGTGGTGGCGGTGGGCGTGGCCAAGCCTCAGCAGGTGGCGGCAACGCGTTTGCAGGTGGCGGCGGTGGTGCTGGCCGCAATGCTGGCGCGGCAGGCTCGGGTACGTCATACGACGACGGCGCAGGGCAGCTTATCTCACTGGTCAACCCGTCATCGGGCGGTGTGACCACTGGCGGCGGCGGTGGTACGGTTCAATTTGAGTCAGGTAGTGAAGCCATAGTCGCATCAGGCGGCAGCGGTGGCGACCTAGGCCAAGCAGGTGGTGCAGGTGACGCCAGTGCAGGCGGTGCGGCAGGCGCAGCCATTGACCGCAACGGCTTCACGCTTGACGAGCAAACAACGGGTGACATACGCGGCGATATTGTCTAA

Tertiary structure

PDB ID
2115af684596abe952a63752668377e7ca1ef1873d798f69758d2554f0d2708d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8935
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Idiomarinaceae bacterium bacteriophage 1N2-2 isolated from alkaline hypersaline soda lake Lake Nakuru in Kenya Lobo,N., Moulton,K.D., Witbeck,W., Lobo,C.G., Rothschild,L.J., Mwaura,F. and Duboise,S.M. 2013-08 — GenBank