Protein

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Genbank accession
AGM11828.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALEPIGDIGVAALTEQVGSETLTWATAAEWDANVSETGVVHEDFGDRDATRIELGFPSTDPVNSGLAYYYPLDEASGPATDATGNGPNGSLSGSTSLGNSGTLGTTCIDFPGGGGDTLDFPDDPVWDITGDITVVHAIYWRGGNDSSSWQGLTSKGGNSSPWAIAYVDGYYVQFQVDGTRYDTGYDLRNTQNTWALHAYQLDSGSIRHQVNGGNEHDTTNSAEAINNTTSDEFVLGARKSGGDEVNALVDDFFVFDYAISDTRLTDLYDAWSTGTLTTATKTVSSSGQPDLQNLVYSLNGESITLDVIGSPGTASEETVTQALDGSSSYTLTWADSHTDFRVRAELTTSDPTVSPTVSQIELVT
Physico‐chemical
properties
protein length:365 AA
molecular weight: 38661,98380 Da
isoelectric point:4,05003
aromaticity:0,09041
hydropathy:-0,36110

Domains

Domains [InterPro]
DC_2317
ATT
1–65
DC_2317 IPR013320 DC_1945
G3DSA:2.60.120.200
STR
60–272
G3DSA:2.60.120.200
IPR013320
STR
62–271
IPR013320
PF13385
LEC
114–263
PF13385
AGM11828.1
1 365
Architecture
ATT
STR
RBD
ATT 1-65 | STR 66-272 | RBD 273-365
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Haloarcula californiae tailed virus 2
[NCBI] 		1273747 No lineage information
Host Haloarcula californiae
[NCBI] 		244363 Archaea > Euryarchaeota > Halobacteria > Halobacteriales > Halobacteriaceae > Haloarcula

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGM11828.1 [NCBI]
Genbank nucleotide accession
KC292028.1 [NCBI]
CDS location
range 35997 -> 37094
strand +
CDS
ATGGCCCTGGAACCCATCGGTGACATCGGCGTGGCAGCCCTCACCGAGCAGGTGGGCAGCGAGACGCTGACGTGGGCCACGGCTGCCGAGTGGGACGCGAACGTGAGCGAGACGGGCGTGGTCCACGAGGACTTCGGGGACCGCGATGCCACCCGCATCGAACTGGGCTTCCCATCCACGGACCCGGTAAACAGCGGCCTCGCGTATTACTACCCGCTGGACGAGGCCTCGGGGCCTGCGACCGACGCCACCGGGAACGGCCCGAACGGGTCGCTGTCCGGCAGCACCAGCCTGGGGAACAGCGGCACCCTCGGCACCACCTGCATCGACTTCCCTGGTGGTGGTGGCGACACGCTGGACTTCCCAGACGACCCGGTGTGGGACATCACGGGCGACATCACCGTGGTCCACGCGATTTACTGGCGCGGGGGTAACGATTCGTCCTCCTGGCAGGGCCTCACGTCAAAGGGCGGGAACAGTTCGCCCTGGGCCATCGCGTACGTGGACGGGTACTACGTGCAGTTCCAGGTGGACGGCACCCGGTACGACACCGGGTACGACCTGCGAAACACGCAGAACACCTGGGCGCTGCACGCTTATCAACTGGATTCGGGCAGCATCCGGCACCAGGTGAACGGCGGGAACGAACACGACACCACGAACAGCGCCGAGGCCATCAATAACACCACCTCGGACGAGTTCGTGCTGGGCGCTCGGAAATCCGGGGGCGACGAGGTGAACGCACTGGTGGACGACTTCTTCGTATTCGACTATGCCATCAGCGACACGCGCCTGACCGACCTGTACGATGCCTGGAGTACGGGCACCCTCACGACGGCCACGAAAACCGTGTCGTCCTCGGGGCAGCCGGACCTCCAGAACCTGGTGTACTCGCTGAACGGCGAGTCCATCACGCTGGACGTAATCGGCAGTCCCGGCACGGCCAGCGAGGAAACGGTCACGCAGGCGCTGGACGGGTCGTCCTCGTACACGCTGACCTGGGCCGACAGCCATACGGACTTCCGGGTGCGGGCCGAACTGACCACGAGCGACCCCACGGTGTCCCCCACCGTCTCGCAGATAGAACTGGTGACGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4e070f09b217ce39080e04fa8d4142ce5806c3ba85a0a96862a53cbbadbc779b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8436
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50