Protein

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Genbank accession
AXY81206.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MARELLSVSSISINDLNDAVVSGTAPSNPDEGMLWLNDKVLKQYTNGTWVTVTLDILRMDEVLKTTINSIKETLGNISADGKLSFIDRKVIAQNIGEIIGEMPSTSKSSKTVLPDYTVLDSKGVGTFSFLRSTALSVGITKDDTVYKEMELTYKNLSSYLASTNPKMWDITDANEEKVITLSNTDDFNGYFLNYYLAEAGMSAEIDKRANELMLKITEGAKSGVVVKDIEGIELYTKDGDLNGSLDLVIEGGTENLAPVGEGRNLLKGGDEAVFVNSNNGSTYPISKSWETDSSGSYWRIRRTEPTLNPSLISLYTTLSASNLDPAVYEADNVVVSFKARSNYARTWNVMQGTAGATPTVYGNLGDIVIGEEWKTFYTVFPKISKGALLRVNPQQASSINGVTDTFYLDLKDWHVTTGTKQYPYSKSPEDLTTPNLVSANKFNLISQMGKVRSISNREENKELTADWVAHTTTKELSNEPYVSELYPYLNLRKRKFSEISLLYRSGGKEYGEGTTGGKYTYLIYLKPLVSNFSVTHNGLNNPKGVFYKDGVRSTSSGNRTLTKGSEYLFIYSFDHRTTYDFWQLQLNNHATKDTEFVMSNFMLFEGDVVSEIEASLPGVGTVIKPSEVTGTPDWAKISSSYVDLPQPLRDAGNGVRDQLRRSDDGRWEIYRRVNEFELQENLDKLSQAGTNIVMMSLYGFTGKSALDRPYATGYVTGLKSSHFSYSKDAIGSTTPDWFLGTNGASGAWAHNLQFKLPTQYGTLTAFKNYATAEANKGNPIRVVYELREPYVEALSDEVQITLDKVFTYPHSNSIYTVFPDLDKSYNHPHPYLRANFLGGADGTRKRTQVDLNDKANQEDVDSINEAIVTVNATSENLGNKLEDTVTELTTVGNTVSGIESKLTQTADGWDFRFSNFATSVSDLEKETTNGFSRINNYIRFENGNIILGQEGSNTFLEISPDRINFNNGGAVVAYITNQTMEITHGIFVQTATIAGMRIQRVPGSNNIGFTII
Physico‐chemical
properties
protein length:1012 AA
molecular weight: 112081,74020 Da
isoelectric point:5,09950
aromaticity:0,09881
hydropathy:-0,39358

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY81206.1
1 1012
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,6906
Central domain 351 549 200 0,3495
C-terminal 550 1012 462 0,3029
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-549
C-terminal
550-1012

Taxonomy

  Name Taxonomy ID Lineage
Phage Aerococcus phage vB_AviM_AVP
[NCBI] 		2495576 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aerococcus viridans
[NCBI] 		1377 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY81206.1 [NCBI]
Genbank nucleotide accession
MH729379 [NCBI]
CDS location
range 67586 -> 70624
strand +
CDS
ATGGCGAGAGAATTATTAAGTGTTTCCAGCATAAGCATTAATGACTTAAATGATGCAGTTGTCTCGGGAACAGCACCTAGTAACCCTGATGAGGGTATGCTATGGTTAAATGATAAAGTATTAAAGCAATATACAAATGGTACTTGGGTTACAGTTACTTTAGACATTCTTAGAATGGACGAAGTTTTAAAGACAACTATTAACAGTATTAAGGAAACTTTAGGTAATATTAGTGCAGACGGTAAGTTGAGCTTTATTGACCGTAAAGTAATCGCTCAAAACATAGGAGAGATTATAGGTGAAATGCCTAGTACAAGTAAATCAAGTAAGACGGTATTACCTGACTACACGGTACTCGATAGTAAAGGTGTTGGTACGTTCTCATTCTTGAGGTCTACAGCTTTGAGTGTTGGTATTACAAAAGACGACACAGTTTATAAAGAAATGGAATTAACGTATAAGAACTTATCATCATATTTAGCAAGCACTAATCCTAAAATGTGGGATATTACTGATGCTAATGAAGAAAAGGTAATTACCTTAAGCAACACAGATGACTTTAATGGTTACTTCCTTAACTACTACTTAGCAGAGGCAGGTATGAGTGCTGAGATTGATAAGCGAGCTAATGAGCTTATGCTTAAAATTACAGAAGGCGCTAAAAGTGGAGTAGTTGTAAAAGACATTGAAGGTATCGAACTTTACACAAAAGATGGGGACTTAAATGGTTCCCTTGACCTTGTTATAGAAGGTGGCACAGAAAACTTAGCACCTGTAGGGGAAGGTAGGAACCTTTTAAAGGGTGGGGACGAGGCAGTATTCGTCAATTCAAATAACGGGTCAACATACCCTATCAGTAAATCTTGGGAAACTGATAGCTCGGGGTCTTACTGGAGAATAAGACGTACTGAACCAACTTTAAACCCTAGCCTAATATCTCTTTACACGACACTATCCGCAAGCAATTTAGACCCAGCTGTATACGAAGCAGATAATGTTGTTGTTAGCTTTAAGGCTAGGTCTAACTATGCAAGAACATGGAATGTAATGCAAGGGACGGCAGGTGCCACACCTACAGTGTATGGTAACCTAGGCGATATTGTTATTGGGGAGGAATGGAAGACTTTCTATACGGTATTCCCTAAAATATCGAAAGGGGCACTATTACGAGTTAACCCCCAGCAAGCGTCAAGTATAAATGGGGTTACTGACACTTTTTATCTAGACCTTAAAGATTGGCATGTAACAACAGGTACTAAGCAGTACCCATACAGCAAATCTCCTGAAGACCTAACGACACCAAACTTAGTTTCTGCGAATAAGTTTAACCTAATATCCCAAATGGGTAAAGTAAGAAGTATTTCTAATAGGGAGGAAAACAAAGAGCTAACAGCAGATTGGGTAGCACACACTACAACAAAGGAGCTATCAAACGAACCTTATGTTTCTGAGTTATACCCTTATCTAAACCTTCGTAAGAGGAAATTTAGTGAAATATCCTTACTTTACAGGTCAGGGGGTAAAGAGTACGGTGAAGGTACAACTGGAGGCAAATACACCTATTTAATTTACCTAAAGCCATTAGTTTCTAACTTTTCAGTTACGCATAACGGGCTAAATAATCCTAAAGGTGTTTTTTACAAGGACGGGGTTCGTAGTACTAGTTCGGGAAATAGAACGCTAACCAAAGGTAGCGAATACCTATTTATTTATAGCTTTGACCATAGAACAACTTATGACTTTTGGCAGTTGCAACTAAACAACCATGCGACAAAAGATACTGAGTTCGTTATGAGCAACTTTATGCTATTTGAGGGTGACGTTGTATCAGAAATAGAGGCTTCCCTACCGGGTGTAGGTACAGTTATAAAACCTAGTGAAGTCACAGGTACACCGGACTGGGCTAAGATTTCATCATCATATGTAGACCTACCCCAACCTTTAAGGGACGCAGGAAACGGTGTTCGGGACCAATTAAGACGTAGTGACGACGGTAGGTGGGAGATTTACCGTAGAGTAAACGAATTTGAACTACAAGAAAACCTTGACAAGTTGTCTCAGGCAGGCACCAACATTGTAATGATGTCCTTGTATGGTTTTACAGGTAAAAGCGCCTTAGATAGACCGTATGCAACCGGGTACGTAACAGGGTTAAAATCTAGTCACTTTTCATATAGTAAGGACGCAATAGGAAGCACTACCCCTGATTGGTTCCTAGGTACGAACGGAGCTAGCGGAGCTTGGGCGCATAATTTGCAGTTCAAGCTACCAACTCAATATGGCACTTTAACAGCCTTCAAGAACTACGCAACAGCAGAAGCTAACAAAGGTAACCCAATTAGGGTTGTATATGAACTGAGAGAACCTTATGTAGAGGCACTATCTGATGAGGTACAAATTACTTTAGACAAAGTATTTACATACCCACACTCTAACAGTATCTATACAGTTTTCCCTGACTTAGATAAATCATATAACCACCCACACCCATACCTAAGAGCAAACTTCCTAGGTGGTGCAGACGGTACAAGGAAACGTACACAAGTAGACTTAAACGATAAGGCAAACCAAGAGGACGTGGATAGCATAAACGAAGCTATCGTAACCGTAAACGCAACTTCGGAAAACTTAGGAAACAAGTTAGAAGATACTGTTACTGAGCTAACTACAGTAGGTAATACGGTTTCAGGAATTGAGTCTAAGTTAACTCAAACTGCTGATGGCTGGGACTTCCGATTCTCCAATTTCGCAACCTCAGTATCAGATTTAGAGAAAGAAACAACAAATGGGTTTAGCCGTATAAATAATTATATCCGTTTCGAGAACGGTAATATTATTCTAGGTCAAGAAGGTTCAAACACCTTCCTAGAGATTTCCCCCGACAGGATTAACTTTAACAATGGTGGGGCAGTAGTTGCCTACATAACAAATCAAACAATGGAAATTACTCATGGTATTTTCGTACAGACTGCAACTATAGCAGGTATGAGAATACAAAGAGTGCCTGGGTCAAACAATATCGGTTTTACAATTATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
503c41d40e44d40b698b70651cf1789ea097ae28475790c39d6ee7285f0fedb1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50