Protein

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Genbank accession
XLY76918.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MRTDKPKTTWTYGYEPISPTNLYYLDYVVFMDMPGPTAREWAQLAVSYAERRCYIANSTYNNGLGFMELYHSQNVTVDSNGFLKKASPIIKVFSDGGFETNEQSKGATVERVSTGVYRVSGVLGLNSDASWGGVNGGFEIPLDANKQPRIWLDYEVESNGSIVVKTYHRTHDSSPSFARNKVEGFSNGDPIDIPSDSFVSIRVNMP
Physico‐chemical
properties
protein length:206 AA
molecular weight: 22936,27080 Da
isoelectric point:5,39717
aromaticity:0,12136
hydropathy:-0,44126

Domains

Domains [InterPro]
DC_0709
STR
4–206
DC_0709
IPR058008
RBD
74–206
IPR058008
XLY76918.1
1 206
Architecture
STR
STR 4-206
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLY76918.1
1 206
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0148
Central domain 11 195 186 0,0141
C-terminal 196 206 10 0,9943
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-195
C-terminal
196-206

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JNP1
[NCBI] 		3388331 No lineage information
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLY76918.1 [NCBI]
Genbank nucleotide accession
PQ785851.1 [NCBI]
CDS location
range 123 -> 743
strand +
CDS
ATGCGAACCGACAAGCCCAAAACAACCTGGACGTATGGATATGAACCTATTAGTCCAACCAACTTATACTACCTAGATTATGTTGTATTTATGGATATGCCTGGACCAACTGCTAGAGAGTGGGCTCAGCTTGCCGTTTCTTATGCGGAAAGGAGATGCTATATAGCTAACTCAACTTATAATAACGGCCTTGGGTTCATGGAACTTTACCACTCACAAAACGTAACCGTAGACTCTAACGGTTTCCTTAAAAAGGCTTCTCCTATAATTAAAGTCTTCAGTGATGGTGGTTTTGAAACAAACGAGCAATCAAAGGGAGCTACAGTGGAGAGAGTTTCCACTGGTGTTTATAGGGTATCAGGTGTGCTTGGTCTAAATTCGGATGCCTCCTGGGGTGGTGTTAATGGTGGCTTTGAGATACCTTTAGATGCAAACAAGCAGCCAAGAATATGGCTAGATTATGAGGTTGAGTCTAATGGCTCAATAGTAGTAAAAACTTACCATCGAACTCACGATTCATCCCCGTCCTTTGCAAGAAATAAAGTTGAAGGTTTTAGTAACGGCGATCCTATAGATATTCCTTCTGACTCTTTCGTTTCAATTCGAGTAAATATGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6962fa92383e69e7a3aa2fee3998504cd76a36ed71a7dc3f25a82a2f9087ea25
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50